RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 HSD3B2P26439 372 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 SRYQ05066 204 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 LTBQ06643 244 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 EFR3AQ14156 821 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 OR2A2Q6IF42 318 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 TAOK1Q7L7X3 1001 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 LUZP2Q86TE4 346 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 KRTAP1-3Q8IUG1 177 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 RELL1Q8IUW5 271 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 ADCY4Q8NFM4 1077 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 ZNF483Q8TF39 744 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-221ENST00000550914 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 SELENOMQ8WWX9 145 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 TMBIM1Q969X1 311 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
PTCH1-221ENST00000550914 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 MRPL57Q9BQC6 102 aaKnown RBP11.66□□□□□ -0.54
PTCH1-221ENST00000550914 ZDHHC18Q9NUE0 388 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 XPR1Q9UBH6 696 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 TRPS1Q9UHF7 1281 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 PYCARDQ9ULZ3 195 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 EIF3LQ9Y262 564 aaKnown RBP11.66□□□□□ -0.54
PTCH1-221ENST00000550914 TESMINQ9Y4I5 508 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
PTCH1-221ENST00000550914 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 A0A1W2PNV4 684 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 A0A1W2PPR1 153 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 TSPAN2O60636 221 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 REM1O75628 298 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 TNFSF13O75888 250 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 PCSK2P16519 638 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 ADSLP30566 484 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 SERPINB9P50453 376 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 CLDN18P56856 261 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 NKX6-1P78426 367 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 DUSP2Q05923 314 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 ZNF628Q5EBL2 1059 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 SGO1Q5FBB7 561 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 LETMD1Q6P1Q0 360 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 CXorf67Q86X51 503 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 GRAMD2AQ8IUY3 354 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 SIMC1Q8NDZ2 872 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 VSTM2LQ96N03 204 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 SFXN2Q96NB2 322 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 TSPYL1Q9H0U9 437 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 MRPL46Q9H2W6 279 aaKnown RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 FARSBQ9NSD9 589 aaKnown RBP11.65□□□□□ -0.54
PTCH1-221ENST00000550914 EHD3Q9NZN3 535 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 VPS29Q9UBQ0 182 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 UTS2RQ9UKP6 389 aa11.65□□□□□ -0.54
PTCH1-221ENST00000550914 DNHD1Q96M86 4753 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 A0A1B0GTL3 188 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 PLOD3O60568 738 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 INHBAP08476 426 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 CT45A8P0DMV1 189 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 CT45A9P0DMV2 189 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 CASQ1P31415 396 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 KRT20P35900 424 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 ALDH9A1P49189 494 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 STARP49675 285 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 MRPS35P82673 323 aaKnown RBP11.64□□□□□ -0.55
PTCH1-221ENST00000550914 CSTF3Q12996 717 aaKnown RBP11.64□□□□□ -0.55
PTCH1-221ENST00000550914 LTB4RQ15722 352 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 ERCC6LQ2NKX8 1250 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 CT45A2Q5DJT8 189 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 C1orf52Q8N6N3 182 aaKnown RBP11.64□□□□□ -0.55
PTCH1-221ENST00000550914 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 PIGTQ969N2 578 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 ADOQ96SZ5 270 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 STMN4Q9H169 189 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-221ENST00000550914 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 DKKL1Q9UK85 242 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 FBXL2Q9UKC9 423 aa11.64□□□□□ -0.55
PTCH1-221ENST00000550914 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-221ENST00000550914 FBN3Q75N90 2809 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 CTIFO43310 598 aaKnown RBP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ZIC3O60481 467 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 TGM6O95932 706 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 KRT6AP02538 564 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 KRT6BP04259 564 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 HEXAP06865 529 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 PEPDP12955 493 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 GRK2P25098 689 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 DPP4P27487 766 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 IL12BP29460 328 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 MC3RP41968 323 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 GSTM5P46439 218 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 KRT6CP48668 564 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 GAS1P54826 345 aa11.63□□□□□ -0.55
PTCH1-221ENST00000550914 DSCR4P56555 118 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 EEFSECP57772 596 aaKnown RBP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 ETF1P62495 437 aaKnown RBP11.63□□□□□ -0.55
PTCH1-221ENST00000550914 RASA2Q15283 850 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms