RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 WIF1Q9Y5W5 379 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 NF1P21359 2839 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 FAM171A2A8MVW0 826 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 HRGP04196 525 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 CRHP06850 196 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 RPS17P08708 135 aaKnown RBP20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 PCSK2P16519 638 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 TAC1P20366 129 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 GFRA1P56159 465 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 MRPS35P82673 323 aaKnown RBP20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 HEPACAMQ14CZ8 416 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 POU4F3Q15319 338 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 LGSNQ5TDP6 509 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 DESI1Q6ICB0 168 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF572Q7Z3I7 529 aaPredicted RBP20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 RELL1Q8IUW5 271 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 CCDC116Q8IYX3 515 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 SLC35A4Q96G79 324 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 ADOQ96SZ5 270 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 ZDHHC18Q9NUE0 388 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 MCM8Q9UJA3 840 aa20.95■□□□□ 0.94
SMARCD1-209ENST00000550477 PLOD2O00469 737 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 HOXC12P31275 282 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 MAGEA12P43365 314 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 STARP49675 285 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 PNLIPRP2P54317 469 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 CDH13P55290 713 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 EEFSECP57772 596 aaKnown RBP20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 NKX6-1P78426 367 aaPredicted RBP20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 RASA2Q15283 850 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 BCL2A1Q16548 175 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 TEX35Q5T0J7 233 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 SYT10Q6XYQ8 523 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 LARP4Q71RC2 724 aaKnown RBP eCLIP20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 GCNT2Q8N0V5 402 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 MMP21Q8N119 569 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 WFDC11Q8NEX6 87 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 OR4K17Q8NGC6 315 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF483Q8TF39 744 aaPredicted RBP20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF681Q96N22 645 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 BTBD9Q96Q07 612 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 PAFAH2Q99487 392 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 FUT8Q9BYC5 575 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 STMN4Q9H169 189 aaPredicted RBP20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 TAS2R9Q9NYW1 312 aa20.94■□□□□ 0.94
SMARCD1-209ENST00000550477 MED12LQ86YW9 2145 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 GNG14A0A1W2PPG7 69 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 CCDC151A5D8V7 595 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 A8MXE2 369 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 MSTNO14793 375 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 ULK1O75385 1050 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 PEPDP12955 493 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 DPP4P27487 766 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 MPIP34949 423 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 CPOXP36551 454 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 LHX2P50458 406 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 CLCQ05315 142 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 CSTF3Q12996 717 aaKnown RBP20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 LTB4RQ15722 352 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 LETMD1Q6P1Q0 360 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 P3H2Q8IVL5 708 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 C1QTNF3Q9BXJ4 246 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 SHCBP1LQ9BZQ2 653 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 SDHAF3Q9NRP4 125 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF226Q9NYT6 803 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 CLCF1Q9UBD9 225 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 OR10H1Q9Y4A9 318 aa20.93■□□□□ 0.94
SMARCD1-209ENST00000550477 MAP1AP78559 2803 aaPredicted RBP20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 SUPT7LO94864 414 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 OR4F21O95013 312 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 INHBBP09529 407 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF708P17019 499 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 CD53P19397 219 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 HMOX2P30519 316 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 SOX18P35713 384 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 ACSM2AQ08AH3 577 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 SPIN4Q56A73 249 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF628Q5EBL2 1059 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 ACSM2BQ68CK6 577 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 FAM180BQ6P0A1 224 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 MEIOBQ8N635 442 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 PIGTQ969N2 578 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 SLC39A3Q9BRY0 314 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 PPP4R1LQ9P1A2 415 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 ZNF180Q9UJW8 692 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 STK38LQ9Y2H1 464 aa20.92■□□□□ 0.94
SMARCD1-209ENST00000550477 A8MT66 165 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 POC1B-GALNT4F8VUJ3 575 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 PCDH7O60245 1069 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 SMNDC1O75940 238 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 GRK2P25098 689 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 HSD17B3P37058 310 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 GSTM5P46439 218 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 PCYT1AP49585 367 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 CLK3P49761 638 aaKnown RBP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 DSCR4P56555 118 aaPredicted RBP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 LTBQ06643 244 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 RPS27LQ71UM5 84 aaKnown RBP20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 FAM9CQ8IZT9 166 aa20.91■□□□□ 0.94
SMARCD1-209ENST00000550477 CDYL2Q8N8U2 506 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms