RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZANQ9Y493 2812 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TRIM64A6NGJ6 449 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 FRG2CA6NGY1 282 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TRIM64BA6NI03 449 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 INAFM1C9JVW0 142 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 C16orf97H3BN30 126 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 OR7A17O14581 309 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 SMAD7O15105 426 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 EMC8O43402 210 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TSPAN2O60636 221 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TMCC2O75069 709 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TNFRSF21O75509 655 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 BCAS2O75934 225 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 SMNDC1O75940 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CNOT4O95628 575 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CBX7O95931 251 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 C2P06681 752 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CD8BP10966 210 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PEPDP12955 493 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 GFAPP14136 432 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CNTFP26441 200 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 DEKP35659 375 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 MAPK12P53778 367 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 B3GALT5-AS1P59052 145 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PSPHP78330 225 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 OCRLQ01968 901 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PLCXD2Q0VAA5 305 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CALCOCO2Q13137 446 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 NAB1Q13506 487 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 EXOSC7Q15024 291 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 NNATQ16517 81 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TRMT12Q53H54 448 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 FRG2Q64ET8 278 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 CHMP1BQ7LBR1 199 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PPM1NQ8N819 430 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 RDH11Q8TC12 318 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 KCTD4Q8WVF5 259 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TM4SF18Q96CE8 201 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PIK3IP1Q96FE7 263 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 SFXN2Q96NB2 322 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 GPR78Q96P69 363 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 FRG2BQ96QU4 278 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 ERP44Q9BS26 406 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 MED18Q9BUE0 208 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 MRPL1Q9BYD6 325 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 BRINP2Q9C0B6 783 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 UBTD1Q9HAC8 227 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 ZNF701Q9NV72 531 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 RNF14Q9UBS8 474 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TRPS1Q9UHF7 1281 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 FBXL2Q9UKC9 423 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 PLLPQ9Y342 182 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 WIF1Q9Y5W5 379 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 SAR1BQ9Y6B6 198 aa8.9□□□□□ -0.98
TRAFD1-207ENST00000550051 TLN2Q9Y4G6 2542 aa8.9□□□□□ -0.99
TRAFD1-207ENST00000550051 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CHD3Q12873 2000 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 HMX2A2RU54 273 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 FAM187AA6NFU0 413 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 SLC22A20A6NK97 555 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 RNF223E7ERA6 249 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 LINC01387J3KSC0 135 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 REM1O75628 298 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 KLHL2O95198 593 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 SIX3O95343 332 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CT45A8P0DMV1 189 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CT45A9P0DMV2 189 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 POU2F1P14859 743 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 TBXA2RP21731 343 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 DPP4P27487 766 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CPOXP36551 454 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 FEN1P39748 380 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 PAFAH1B1P43034 410 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 PTH2RP49190 550 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 PNLIPRP2P54317 469 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 GAS1P54826 345 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 DSCR4P56555 118 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CLDN15P56746 228 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 EEFSECP57772 596 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 TRA2BP62995 288 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 EFR3AQ14156 821 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 FGFBP1Q14512 234 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 SLMAPQ14BN4 828 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CT45A2Q5DJT8 189 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 VWA1Q6PCB0 445 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 C22orf34Q6ZV56 151 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 SH2D5Q6ZV89 423 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 PLEKHM3Q6ZWE6 761 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 P4HA3Q7Z4N8 544 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 MILR1Q7Z6M3 343 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CNEP1R1Q8N9A8 125 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 ZNF610Q8N9Z0 462 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 OR52B6Q8NGF0 335 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 OR52R1Q8NGF1 315 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 ZNF675Q8TD23 568 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 CAVIN3Q969G5 261 aa8.89□□□□□ -0.99
TRAFD1-207ENST00000550051 TMBIM1Q969X1 311 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms