RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KRTAP1-3Q8IUG1 177 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 SAMD14Q8IZD0 417 aaPredicted RBP12.31□□□□□ -0.44
TROAP-211ENST00000549891 OR4F6Q8NGB9 312 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 ZNF592Q92610 1267 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 TM4SF18Q96CE8 201 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 ERP27Q96DN0 273 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 G6PC3Q9BUM1 346 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 PFDN4Q9NQP4 134 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 GPR55Q9Y2T6 319 aaPredicted RBP12.31□□□□□ -0.44
TROAP-211ENST00000549891 DSCAMO60469 2012 aa12.31□□□□□ -0.44
TROAP-211ENST00000549891 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 A0A1W2PNV4 684 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 HCRTR2O43614 444 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 TNFSF13O75888 250 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
TROAP-211ENST00000549891 PCSK2P16519 638 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ZNF708P17019 499 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 IL12BP29460 328 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 MC3RP41968 323 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 STARP49675 285 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 CLDN18P56856 261 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 GALNT1Q10472 559 aaPredicted RBP12.3□□□□□ -0.44
TROAP-211ENST00000549891 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ZDHHC24Q6UX98 284 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ZNF675Q8TD23 568 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 NUDT8Q8WV74 236 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ARSGQ96EG1 525 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 SLC35A4Q96G79 324 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 NSUN5Q96P11 429 aaKnown RBP12.3□□□□□ -0.44
TROAP-211ENST00000549891 FAM111AQ96PZ2 611 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 BTBD9Q96Q07 612 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ADOQ96SZ5 270 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 SLC39A3Q9BRY0 314 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 BDH2Q9BUT1 245 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 ZBTB26Q9HCK0 441 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 UTS2RQ9UKP6 389 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 HEATR5AQ86XA9 2040 aa12.3□□□□□ -0.44
TROAP-211ENST00000549891 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 ESRRBO95718 433 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 PDYNP01213 254 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 COL6A2P12110 1019 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 PEPDP12955 493 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 GRK2P25098 689 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 DPP4P27487 766 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 CD79BP40259 229 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 PNLIPRP2P54317 469 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 DSCR4P56555 118 aaPredicted RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 EEFSECP57772 596 aaKnown RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 MRPS35P82673 323 aaKnown RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 FGFBP1Q14512 234 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 LTB4RQ15722 352 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 PLXDC2Q6UX71 529 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 PLD6Q8N2A8 252 aaKnown RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 MEIOBQ8N635 442 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 CNEP1R1Q8N9A8 125 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 CNRIP1Q96F85 164 aaPredicted RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 PGM2Q96G03 612 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 CCL19Q99731 98 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 ACSS3Q9H6R3 686 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 GRPEL1Q9HAV7 217 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 FARSBQ9NSD9 589 aaKnown RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 GIMAP4Q9NUV9 329 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 ELOVL5Q9NYP7 299 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 C6orf203Q9P0P8 240 aaPredicted RBP12.29□□□□□ -0.44
TROAP-211ENST00000549891 XPR1Q9UBH6 696 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 VPS29Q9UBQ0 182 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 FBXL2Q9UKC9 423 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 NFU1Q9UMS0 254 aa12.29□□□□□ -0.44
TROAP-211ENST00000549891 A0A1B0GTL3 188 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 TSPAN2O60636 221 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 TGM6O95932 706 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 INHBAP08476 426 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 HSD3B1P14060 373 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 HSD3B2P26439 372 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 DUSP2Q05923 314 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 TRADDQ15628 312 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 OR5M10Q6IEU7 315 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
TROAP-211ENST00000549891 CCDC116Q8IYX3 515 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 C1orf52Q8N6N3 182 aaKnown RBP12.28□□□□□ -0.44
TROAP-211ENST00000549891 OR4K17Q8NGC6 315 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 STARD4Q96DR4 205 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 PIK3IP1Q96FE7 263 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 COX4I2Q96KJ9 171 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 WFIKKN1Q96NZ8 548 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
TROAP-211ENST00000549891 SHCBP1LQ9BZQ2 653 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
TROAP-211ENST00000549891 SDHAF3Q9NRP4 125 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 KLHL28Q9NXS3 571 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms