RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PPP6CO00743 305 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 DIRAS3O95661 229 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 IGHA1P01876 353 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 LPLP06858 475 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 UQCRC1P31930 480 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HNRNPH1P31943 449 aaKnown RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CCR10P46092 362 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 LINGO4Q6UY18 593 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 COMMD6Q7Z4G1 85 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 DEFB123Q8N688 67 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 OTUD6BQ8N6M0 293 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ELMO1Q92556 727 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZBED6CLQ96FA7 236 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 COL21A1Q96P44 957 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 OR52B2Q96RD2 323 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MED18Q9BUE0 208 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CCDC68Q9H2F9 335 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MAT2BQ9NZL9 334 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 TMEM9Q9P0T7 183 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 TXNDC16Q9P2K2 825 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 BAIAP2L1Q9UHR4 511 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SH2B3Q9UQQ2 575 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 GINS2Q9Y248 185 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 TRAPPC4Q9Y296 219 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF281Q9Y2X9 895 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 AP4B1Q9Y6B7 739 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 IGHV1-45A0A0A0MS14 117 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FAM170BA6NMN3 283 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF561-AS1K7EIQ3 104 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 NME4O00746 187 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 YY2O15391 372 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CDC40O60508 579 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HIST1H2AGP0C0S8 130 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PABPC4LP0CB38 370 aaKnown RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HIST1H2ADP20671 130 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ACSL1P33121 698 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SLC37A1P57057 533 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SELENOWP63302 87 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FOXO1Q12778 655 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ILF3Q12906 894 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ACOX1Q15067 660 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PCOLCEQ15113 449 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 RBM48Q5RL73 367 aaKnown RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MEDAGQ5VYS4 303 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MFSD12Q6NUT3 480 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF529Q6P280 563 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 C12orf76Q8N812 135 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HAS2Q92819 552 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MUL1Q969V5 352 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PPWD1Q96BP3 646 aaKnown RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HIST1H2AHQ96KK5 128 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ZFP3Q96NJ6 502 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 HIST1H2AJQ99878 128 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 H2AFJQ9BTM1 129 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 GHITMQ9H3K2 345 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 VSX1Q9NZR4 365 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CNIH4Q9P003 139 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PRODH2Q9UF12 536 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CAPN7Q9Y6W3 813 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CCDC187A0A096LP49 1063 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 PRR23AA6NEV1 266 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 AGAP5A6NIR3 686 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 HAT1O14929 419 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 SEC22BO75396 215 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 PTBP3O95758 552 aaKnown RBP4.53□□□□□ -1.69
SCAF11-212ENST00000549162 CBX7O95931 251 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MOCS2O96007 188 aaPredicted RBP4.53□□□□□ -1.69
SCAF11-212ENST00000549162 ADAP00813 363 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MT-ATP6P00846 226 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 CCDC159P0C7I6 412 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 THEGLP0DJG4 465 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 GRK3P35626 688 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 STAT5AP42229 794 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MVKQ03426 396 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 RGS1Q08116 209 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 IKZF1Q13422 519 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 DAG1Q14118 895 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 SSPNQ14714 243 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 VMACQ2NL98 169 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 FAM214AQ32MH5 1076 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 PRRT3Q5FWE3 981 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MROH9Q5TGP6 573 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MMAAQ8IVH4 418 aaKnown RBP4.53□□□□□ -1.69
SCAF11-212ENST00000549162 ULK2Q8IYT8 1036 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 TTC29Q8NA56 475 aaPredicted RBP4.53□□□□□ -1.69
SCAF11-212ENST00000549162 C16orf52Q8NHV5 167 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 MDM1Q8TC05 714 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 PAQR8Q8TEZ7 354 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 HPS1Q92902 700 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 INTS12Q96CB8 462 aaKnown RBP4.53□□□□□ -1.69
SCAF11-212ENST00000549162 ELP4Q96EB1 424 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 KCNJ15Q99712 375 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 COQ7Q99807 217 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 CDCA4Q9BXL8 241 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 ARL8BQ9NVJ2 186 aa4.53□□□□□ -1.69
SCAF11-212ENST00000549162 SLC7A7Q9UM01 511 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms