RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ERCC6LQ2NKX8 1250 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 ZNF628Q5EBL2 1059 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 CAMKMTQ7Z624 323 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 PLCZ1Q86YW0 608 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 WFDC11Q8NEX6 87 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 DCAKDQ8WVC6 231 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 EFHD2Q96C19 240 aaPredicted RBP18.49■□□□□ 0.55
SSH1-207ENST00000547862 CTHRC1Q96CG8 243 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 ZNF681Q96N22 645 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 TM9SF2Q99805 663 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 JKAMPQ9P055 326 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 VPS29Q9UBQ0 182 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 DLGAP4Q9Y2H0 992 aa18.49■□□□□ 0.55
SSH1-207ENST00000547862 VPS13CQ709C8 3753 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 SH3D21A4FU49 640 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 PLOD2O00469 737 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 SCO2O43819 266 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 URI1O94763 535 aaPredicted RBP18.48■□□□□ 0.55
SSH1-207ENST00000547862 KRT6AP02538 564 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 KRT6BP04259 564 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 COL6A2P12110 1019 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 CPN1P15169 458 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 HOXB4P17483 251 aaPredicted RBP18.48■□□□□ 0.55
SSH1-207ENST00000547862 DRD5P21918 477 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 KRT6CP48668 564 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 HMGCS1Q01581 520 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 SH2D4BQ5SQS7 431 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 NPSR1Q6W5P4 371 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 Q71RC1 249 aaPredicted RBP18.48■□□□□ 0.55
SSH1-207ENST00000547862 P4HA3Q7Z4N8 544 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 UBQLNLQ8IYU4 475 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 C16orf45Q96MC5 204 aaPredicted RBP18.48■□□□□ 0.55
SSH1-207ENST00000547862 TMEM237Q96Q45 408 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 G6PC3Q9BUM1 346 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 FUT8Q9BYC5 575 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 FOLH1BQ9HBA9 442 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 GIMAP4Q9NUV9 329 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 CLCF1Q9UBD9 225 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 FETUBQ9UGM5 382 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 MCM8Q9UJA3 840 aa18.48■□□□□ 0.55
SSH1-207ENST00000547862 GPR55Q9Y2T6 319 aaPredicted RBP18.48■□□□□ 0.55
SSH1-207ENST00000547862 OR6C70A6NIJ9 312 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 SMNDC1O75940 238 aaKnown RBP eCLIP18.47■□□□□ 0.55
SSH1-207ENST00000547862 DRD2P14416 443 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 TAC1P20366 129 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 GRK2P25098 689 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 SRD5A2P31213 254 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 HSD17B3P37058 310 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 LHX2P50458 406 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 TRA2BP62995 288 aaKnown RBP18.47■□□□□ 0.55
SSH1-207ENST00000547862 BTKQ06187 659 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 CSTF3Q12996 717 aaKnown RBP18.47■□□□□ 0.55
SSH1-207ENST00000547862 RASA2Q15283 850 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 KRTAP21-3Q3LHN1 58 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 AAGABQ6PD74 315 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 GPRIN3Q6ZVF9 776 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 LARP4Q71RC2 724 aaKnown RBP eCLIP18.47■□□□□ 0.55
SSH1-207ENST00000547862 OR4K17Q8NGC6 315 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 ZNF675Q8TD23 568 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 MBD6Q96DN6 1003 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 BTBD9Q96Q07 612 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 ACPTQ9BZG2 426 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 PLEKHF2Q9H8W4 249 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 DMGDHQ9UI17 866 aaKnown RBP18.47■□□□□ 0.55
SSH1-207ENST00000547862 OR10H1Q9Y4A9 318 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 NAV3Q8IVL0 2385 aa18.47■□□□□ 0.55
SSH1-207ENST00000547862 EXOC1LA0A1B0GW35 172 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 TO15178 435 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 RCBTB2O95199 551 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 HRGP04196 525 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 GFRA1P56159 465 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 RAE1P78406 368 aaKnown RBP18.46■□□□□ 0.55
SSH1-207ENST00000547862 STX5Q13190 355 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 UNC50Q53HI1 259 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 SCIMPQ6UWF3 145 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 RELL1Q8IUW5 271 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 SLC44A2Q8IWA5 706 aaPredicted RBP18.46■□□□□ 0.55
SSH1-207ENST00000547862 FAM9CQ8IZT9 166 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 CNEP1R1Q8N9A8 125 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 NOA1Q8NC60 698 aaKnown RBP18.46■□□□□ 0.55
SSH1-207ENST00000547862 METTL6Q8TCB7 284 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 WNT2BQ93097 391 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 MTBPQ96DY7 904 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 SLC35A4Q96G79 324 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 APIPQ96GX9 242 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 ZFP3Q96NJ6 502 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 KCNA7Q96RP8 456 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 SMR3AQ99954 134 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 DLL4Q9NR61 685 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 ZNF180Q9UJW8 692 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 PACSIN3Q9UKS6 424 aa18.46■□□□□ 0.55
SSH1-207ENST00000547862 A0A087WUV0 522 aaPredicted RBP18.45■□□□□ 0.54
SSH1-207ENST00000547862 A0A1W2PPR1 153 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 TSPAN2O60636 221 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 TGM6O95932 706 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 SNRPAP09012 282 aaKnown RBP18.45■□□□□ 0.54
SSH1-207ENST00000547862 CT45A8P0DMV1 189 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 CT45A9P0DMV2 189 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 HSD3B1P14060 373 aa18.45■□□□□ 0.54
SSH1-207ENST00000547862 HSD3B2P26439 372 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms