RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 GGHQ92820 318 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 L3HYPDHQ96EM0 354 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 WRAP53Q9BUR4 548 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 VN1R3Q9BXE9 311 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 KCNH6Q9H252 994 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SLC6A15Q9H2J7 730 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 POT1Q9NUX5 634 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 IKZF2Q9UKS7 526 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 FBXL3Q9UKT7 428 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MAU2Q9Y6X3 613 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 LINC01553A4QN01 128 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 PIRO00625 290 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 STX16O14662 325 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MPZL2O60487 215 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CLDN11O75508 207 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 NCR1O76036 304 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 GABARAPO95166 117 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 NPPAP01160 153 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 C1QCP02747 245 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 C8orf89P0DMQ9 161 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DNAJB1P25685 340 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 LCN1P31025 176 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 RPL9P32969 192 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 NUP62P37198 522 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SPAM1P38567 509 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 PSMD4P55036 377 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CDH11P55287 796 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 RPS13P62277 151 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OC90Q02509 493 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DBPQ10586 325 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ADAM15Q13444 863 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SMUG1Q53HV7 270 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ZMAT1Q5H9K5 638 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR2G6Q5TZ20 316 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ATG9BQ674R7 924 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 RAET1GQ6H3X3 334 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ELP2Q6IA86 826 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ADGRG2Q8IZP9 1017 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SRFBP1Q8NEF9 429 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR10T2Q8NGX3 314 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR5J2Q8NH18 312 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SCAMP4Q969E2 229 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 TSGA13Q96PP4 275 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ATOH8Q96SQ7 321 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DOHHQ9BU89 302 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MND1Q9BWT6 205 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ARL6Q9H0F7 186 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DPAGT1Q9H3H5 408 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 IKZF5Q9H5V7 419 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 GALNT9Q9HCQ5 603 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 HPF1Q9NWY4 346 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MBD2Q9UBB5 411 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 RPS6KB2Q9UBS0 482 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 PHF11Q9UIL8 331 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 FBXW2Q9UKT8 454 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 GRIP1Q9Y3R0 1128 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MAB21L2Q9Y586 359 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MTCH2Q9Y6C9 303 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 EML5Q05BV3 1969 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR6C74A6NCV1 312 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 TRIM64BA6NI03 449 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 C22orf46C9J442 243 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 H7C2Y5 167 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 K7ERQ8 282 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 RTCAO00442 366 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 LYRM1O43325 122 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 ENTPD6O75354 484 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 HRGP04196 525 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 HTR1AP08908 422 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 HPGDP15428 266 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 NTSP30990 170 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CDKN2CP42773 168 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 PCBP3P57721 371 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CDK10Q15131 360 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MED27Q6P2C8 311 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DHRS4L2Q6PKH6 230 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 PRSS55Q6UWB4 352 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 FRRS1Q6ZNA5 592 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 LIMS2Q7Z4I7 341 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 TMEM179BQ7Z7N9 219 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 GLCCI1Q86VQ1 547 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 KLBQ86Z14 1044 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR6K6Q8NGW6 343 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 OR8K3Q8NH51 312 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 GEMIN6Q8WXD5 167 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 VMP1Q96GC9 406 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 COQ10AQ96MF6 247 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 SECISBP2Q96T21 854 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 NELL2Q99435 816 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 TTLL2Q9BWV7 592 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 C11orf54Q9H0W9 315 aaPredicted RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 CARS2Q9HA77 564 aaKnown RBP5.18□□□□□ -1.58
LIMA1-203ENST00000547825 MAN2B2Q9Y2E5 1009 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 DOCK8Q8NF50 2099 aa5.18□□□□□ -1.58
LIMA1-203ENST00000547825 HMX3A6NHT5 357 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 ZNF487B1APH4 448 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 PCDH17O14917 1159 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 HPGDSO60760 199 aa5.17□□□□□ -1.58
LIMA1-203ENST00000547825 RPP14O95059 124 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms