RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 KIAA1211LQ6NV74 962 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TBX5Q99593 518 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ACPTQ9BZG2 426 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 MED11Q9P086 117 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 NEU3Q9UQ49 428 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CH25HO95992 272 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 HLA-DQB1P01920 261 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ANXA4P09525 319 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 LAMP1P11279 417 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PTBP1P26599 531 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PBLDP30039 288 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 MAPKAPK2P49137 400 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PURAQ00577 322 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TRAM2Q15035 370 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GUCA2BQ16661 112 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SPIN4Q56A73 249 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 FAM27D1Q5T7N8 215 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 FAM180BQ6P0A1 224 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 UBE2R2Q712K3 238 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SERPINA9Q86WD7 417 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 LSRQ86X29 649 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 OR52I1Q8NGK6 324 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 KAT2AQ92830 837 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SAMD11Q96NU1 681 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CA10Q9NS85 328 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SEMA3GQ9NS98 782 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GHRLQ9UBU3 117 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 RASD1Q9Y272 281 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ASB4Q9Y574 426 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SAP18O00422 153 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 RAB36O95755 333 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SULT1A3P0DMM9 295 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SULT1A4P0DMN0 295 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SDC1P18827 310 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PXNP49023 591 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PRKAG1P54619 331 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 BEX3Q00994 111 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 IKZF1Q13422 519 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 BEX5Q5H9J7 111 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TMUB2Q71RG4 321 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ZNF565Q8N9K5 539 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GPR26Q8NDV2 337 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 GOT1L1Q8NHS2 421 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 ARMC5Q96C12 935 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 DUSP26Q9BV47 211 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SARGQ9BW04 601 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 MTG2Q9H4K7 406 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 TMEM30AQ9NV96 361 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 MYEF2Q9P2K5 600 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 SLC22A14Q9Y267 594 aa11.29□□□□□ -0.6
RBFOX1-208ENST00000547372 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 FZD7O75084 574 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 DEFA6Q01524 100 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 ACVR1Q04771 509 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 HECTD3Q5T447 861 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 KIAA1161Q6NSJ0 714 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 SSX6Q7RTT6 188 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 TSEN54Q7Z6J9 526 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 RELTQ969Z4 430 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 NMUR1Q9HB89 426 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 RPS6KB2Q9UBS0 482 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 TRBV4-1A0A0J9YWV2 114 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 IFNW1P05000 195 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 KLK3P07288 261 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PRPS2P11908 318 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 ACHEP22303 614 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 OR10A3P58181 314 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PTSQ03393 145 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PDZK1IP1Q13113 114 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PCBP2Q15366 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 TSC22D1Q15714 1073 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 CLEC12AQ5QGZ9 265 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 ATXN7L2Q5T6C5 722 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PUSL1Q8N0Z8 303 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 CHST14Q8NCH0 376 aa11.28□□□□□ -0.6
RBFOX1-208ENST00000547372 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms