RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KCNA7Q96RP8 456 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 ADOQ96SZ5 270 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 OR2B2Q9GZK3 357 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 IQCGQ9H095 443 aaKnown RBP8.54□□□□□ -1.04
YBX3-218ENST00000546298 CALHM2Q9HA72 323 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 FOLH1BQ9HBA9 442 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 MYNNQ9NPC7 610 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SERHLQ9NQF3 203 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 SDHAF3Q9NRP4 125 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 OXSMQ9NWU1 459 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 METRNQ9UJH8 293 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 MRTO4Q9UKD2 239 aaKnown RBP8.54□□□□□ -1.04
YBX3-218ENST00000546298 EMCNQ9ULC0 261 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 EDARQ9UNE0 448 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 MAPRE3Q9UPY8 281 aa8.54□□□□□ -1.04
YBX3-218ENST00000546298 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 SMIM23A6NLE4 172 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 SLC28A1O00337 649 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 UBFD1O14562 309 aaKnown RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 RGS14O43566 566 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 SEC22BO75396 215 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 IL18BPO95998 194 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CHEK2O96017 543 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CT45A8P0DMV1 189 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CT45A9P0DMV2 189 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 UROSP10746 265 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CPN1P15169 458 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 KRT4P19013 534 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 BMP5P22003 454 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CTSSP25774 331 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 UQCRC1P31930 480 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 OPRM1P35372 400 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 PTGDSP41222 190 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 DLX5P56178 289 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 EEF1A1P68104 462 aaKnown RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 ZNF155Q12901 538 aaPredicted RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 ZNHIT3Q15649 155 aaPredicted RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CYP27C1Q4G0S4 372 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 CT45A2Q5DJT8 189 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 EEF1A1P5Q5VTE0 462 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 FAM71E1Q6IPT2 247 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 AAGABQ6PD74 315 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 FRMD7Q6ZUT3 714 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 SLC44A2Q8IWA5 706 aaPredicted RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 GSPT2Q8IYD1 628 aaKnown RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 WDSUB1Q8N9V3 476 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 TNIP2Q8NFZ5 429 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 OR7G2Q8NG99 324 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 RNASE6Q93091 150 aaKnown RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 ZFP3Q96NJ6 502 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 TRIB1Q96RU8 372 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 ACBD3Q9H3P7 528 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 HHATLQ9HCP6 504 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 GALNT9Q9HCQ5 603 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 Q9N2J8 555 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 DKKL1Q9UK85 242 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 C19orf53Q9UNZ5 99 aaPredicted RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 L3MBTL1Q9Y468 752 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 POLR3HQ9Y535 204 aaPredicted RBP8.53□□□□□ -1.04
YBX3-218ENST00000546298 WIF1Q9Y5W5 379 aa8.53□□□□□ -1.04
YBX3-218ENST00000546298 ZNF407Q9C0G0 2248 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 MBD3L4A6NDZ8 208 aaPredicted RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 MBD3L3A6NE82 208 aaPredicted RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 MBD3L5A6NJ08 208 aaPredicted RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 H0Y3Z8 333 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 PLOD2O00469 737 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 TSPAN2O60636 221 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 TRIM13O60858 407 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 SHBGP04278 402 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 JUNP05412 331 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 IFI6P09912 130 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 NEFHP12036 1026 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 DDX5P17844 614 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 CHMP24386 653 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 GRK2P25098 689 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 CLK3P49761 638 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 PSMD4P55036 377 aaKnown RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 FOXA1P55317 472 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 CORO7P57737 925 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 SLC18A2Q05940 514 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 DECR1Q16698 335 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 LIPMQ5VYY2 423 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 FAM219BQ5XKK7 198 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 DESI1Q6ICB0 168 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 NOXRED1Q6NXP6 359 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 CHMP1BQ7LBR1 199 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 IFNEQ86WN2 208 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 RELL2Q8NC24 303 aaPredicted RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 OR4K17Q8NGC6 315 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 ZFP28Q8NHY6 868 aa8.52□□□□□ -1.05
YBX3-218ENST00000546298 MBD3L2Q8NHZ7 208 aaPredicted RBP8.52□□□□□ -1.05
YBX3-218ENST00000546298 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms