RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 P2RY14Q15391 338 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 ZNF311Q5JNZ3 666 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 KIAA1161Q6NSJ0 714 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 PAMR1Q6UXH9 720 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 NKAIN4Q8IVV8 208 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 GALNT12Q8IXK2 581 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CLDN22Q8N7P3 220 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 IL17RCQ8NAC3 791 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 BBS1Q8NFJ9 593 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 KAT2AQ92830 837 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 TMEM245Q9H330 911 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 C6orf106Q9H6K1 298 aaPredicted RBP14.84□□□□□ -0.03
LDLR-204ENST00000545707 POLMQ9NP87 494 aaPredicted RBP14.84□□□□□ -0.03
LDLR-204ENST00000545707 TAS2R7Q9NYW3 318 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 SNX7Q9UNH6 387 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 MYO10Q9HD67 2058 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 SHISA3A0PJX4 238 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CARNS1A5YM72 827 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 SLC30A4O14863 429 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CASKO14936 926 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 HPGDSO60760 199 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 TIMP1P01033 207 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CERS1P27544 350 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 PRDX1Q06830 199 aaKnown RBP14.84□□□□□ -0.03
LDLR-204ENST00000545707 SLC9A5Q14940 896 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 GAB4Q2WGN9 574 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 ZNF791Q3KP31 576 aaPredicted RBP14.84□□□□□ -0.03
LDLR-204ENST00000545707 SLC25A30Q5SVS4 291 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 SLC36A4Q6YBV0 504 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 ZNF730Q6ZMV8 503 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 FAM181AQ8N9Y4 354 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 BBS10Q8TAM1 723 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 OTULINQ96BN8 352 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 ARMC5Q96C12 935 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 DEPDC7Q96QD5 511 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 TMEM246Q9BRR3 403 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CHST2Q9Y4C5 530 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 C2orf92A0A1B0GVN3 265 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 TBC1D3BA6NDS4 549 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 HMX3A6NHT5 357 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 FCMRO60667 390 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 UBXN7O94888 489 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 RPN2P04844 631 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 DDOSTP39656 456 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 MC3RP41968 323 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 GPR4P46093 362 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 HTRA3P83110 453 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 RAB40BQ12829 278 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 ASAH1Q13510 395 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 TPBGQ13641 420 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 LTB4RQ15722 352 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 NDUFA9Q16795 377 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 SLC35F1Q5T1Q4 408 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 ADAMTSL4Q6UY14 1074 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 QSOX2Q6ZRP7 698 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 ACOT4Q8N9L9 421 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 OR9A2Q8NGT5 310 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 UFD1Q92890 307 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 AIFM1O95831 613 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 PAK4O96013 591 aaPredicted RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 DRD2P14416 443 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 CELP19835 753 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 MYL9P24844 172 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 TRIM23P36406 574 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 VASPP50552 380 aaPredicted RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 RNF144AP50876 292 aaPredicted RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 SNRPNP63162 240 aaKnown RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 MLC1Q15049 377 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 NDUFA5Q16718 116 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 FAM214AQ32MH5 1076 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 Q5BKY6 102 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 FBXL6Q8N531 539 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 SIMC1Q8NDZ2 872 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 OR4Q3Q8NH05 313 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 DOK4Q8TEW6 326 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 ZFPM2Q8WW38 1151 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 SLC7A6Q92536 515 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 CAMK1GQ96NX5 476 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 OR7D2Q96RA2 312 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 SNX18Q96RF0 628 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 SLC38A1Q9H2H9 487 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 BCL2L10Q9HD36 194 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 FGF20Q9NP95 211 aaPredicted RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 MOSPD1Q9UJG1 213 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 CLCA2Q9UQC9 943 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 ASB4Q9Y574 426 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 CSNK1G3Q9Y6M4 447 aa14.83□□□□□ -0.04
LDLR-204ENST00000545707 NUP210Q8TEM1 1887 aaPredicted RBP14.83□□□□□ -0.04
LDLR-204ENST00000545707 KIF26AQ9ULI4 1882 aaPredicted RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 TMEM129A0AVI4 362 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 NARSO43776 548 aaKnown RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 PIP5K1CO60331 668 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CLEC3AO75596 197 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ZNF24P17028 368 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CDH11P55287 796 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CLDN2P57739 230 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ZNF628Q5EBL2 1059 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CNIH2Q6PI25 160 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 HSDL2Q6YN16 418 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms