RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CELA3AP09093 270 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SLC35E2P0CK97 266 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 LAMP1P11279 417 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 NQO1P15559 274 aaKnown RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 IL1RNP18510 177 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 UQCRC2P22695 453 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CPN2P22792 545 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 APCP25054 2843 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 HTR1EP28566 365 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 NUP214P35658 2090 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PGM1P36871 562 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 MANFP55145 182 aaKnown RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 RIPPLY3P57055 190 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PSME3P61289 254 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PHC1P78364 1004 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 MXRA7P84157 204 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PRR5P85299 388 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 RBBP4Q09028 425 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SF3A3Q12874 501 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 RIPK1Q13546 671 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 RUNX2Q13950 521 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 NFYCQ13952 458 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 VEZF1Q14119 521 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 INAQ16352 499 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SPRED3Q2MJR0 410 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 DEFB134Q4QY38 66 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 RUNDC3AQ59EK9 446 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 C6orf163Q5TEZ5 329 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PRAMEF8Q5VWM4 474 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PRAMEF7Q5VXH5 474 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 LINC00696Q6ZRV3 163 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 FJX1Q86VR8 437 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 MCEMP1Q8IX19 187 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ST13P4Q8IZP2 240 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CA13Q8N1Q1 262 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 LRRC25Q8N386 305 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 FBXW8Q8N3Y1 598 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 METTL27Q8N6F8 245 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 KRTCAP2Q8N6L1 136 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 POU5F2Q8N7G0 328 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PLPP5Q8NEB5 264 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CATSPER1Q8NEC5 780 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 OR7A2PQ8NGA2 310 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 OR4K14Q8NGD5 310 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 NR4A3Q92570 626 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 JADE3Q92613 823 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 VPS33AQ96AX1 596 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ASB9Q96DX5 294 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 MARK4Q96L34 752 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 AMDHD1Q96NU7 426 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PANX1Q96RD7 426 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 LMF1Q96S06 567 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 MESP1Q9BRJ9 268 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CRB3Q9BUF7 120 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 EBPLQ9BY08 206 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CADM1Q9BY67 442 aaKnown RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PAIP1Q9H074 479 aaKnown RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 TMEM38AQ9H6F2 299 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 KAT8Q9H7Z6 458 aaKnown RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SYNPO2LQ9H987 977 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 SH3BP4Q9P0V3 963 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PTGFRNQ9P2B2 879 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CD300AQ9UGN4 299 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PRDM4Q9UKN5 801 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 UTS2RQ9UKP6 389 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 NAALAD2Q9Y3Q0 740 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 KLF2Q9Y5W3 355 aaPredicted RBP6.12□□□□□ -1.43
CDCA3-209ENST00000544610 ADGRG4Q8IZF6 3080 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 PDZD2O15018 2839 aa6.12□□□□□ -1.43
CDCA3-209ENST00000544610 CELSR1Q9NYQ6 3014 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 ERICH4A6NGS2 130 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 DUXAA6NLW8 204 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 WASHC1A8K0Z3 465 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 C4orf51C9J302 202 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 SAP18O00422 153 aaKnown RBP6.11□□□□□ -1.43
CDCA3-209ENST00000544610 RTCAO00442 366 aaKnown RBP6.11□□□□□ -1.43
CDCA3-209ENST00000544610 CHST10O43529 356 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 DYRK3O43781 588 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 MED26O95402 600 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 FHP07954 510 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 ZGLP1P0C6A0 271 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 COX6A1P12074 109 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 PORP16435 677 aaPredicted RBP6.11□□□□□ -1.43
CDCA3-209ENST00000544610 ME2P23368 584 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 CERS1P27544 350 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 PTGER4P35408 488 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 OR1D4P47884 311 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 TNFSF10P50591 281 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 DGKQP52824 942 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 RAB8AP61006 207 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 HBA1P69905 142 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 MAP4K2Q12851 820 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 TRIM25Q14258 630 aaKnown RBP6.11□□□□□ -1.43
CDCA3-209ENST00000544610 GNA13Q14344 377 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 MPEG1Q2M385 716 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 PGS1Q32NB8 556 aa6.11□□□□□ -1.43
CDCA3-209ENST00000544610 PAGE3Q5JUK9 113 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms