RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GCNT2Q8N0V5 402 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TAGAPQ8N103 731 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CA13Q8N1Q1 262 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CNEP1R1Q8N9A8 125 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TRPV3Q8NET8 790 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 OR10H5Q8NGA6 315 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 UTP15Q8TED0 518 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SMAP2Q8WU79 429 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SLC44A1Q8WWI5 657 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PROX1Q92786 737 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ANKRD9Q96BM1 317 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 STARD4Q96DR4 205 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 NEIL1Q96FI4 390 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PGM2Q96G03 612 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF845Q96IR2 970 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 FAR2Q96K12 515 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 ADAD1Q96M93 576 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 VRK1Q99986 396 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TUBA1CQ9BQE3 449 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 PIGQQ9BRB3 760 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 TMEM204Q9BSN7 226 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 HAUS8Q9BT25 410 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 OR8D2Q9GZM6 311 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 NUP62CLQ9H1M0 184 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 OR10A4Q9H209 315 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 P2RY12Q9H244 342 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 RHBGQ9H310 441 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 UBQLN3Q9H347 655 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CHODLQ9H9P2 273 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 EML4Q9HC35 981 aaKnown RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 NGBQ9NPG2 151 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 HOMER3Q9NSC5 361 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 DNAJC11Q9NVH1 559 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 DLGAP4Q9Y2H0 992 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 C15orf41Q9Y2V0 281 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SLC6A5Q9Y345 797 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 RNF115Q9Y4L5 304 aa3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CHCHD2Q9Y6H1 151 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-220ENST00000544550 CNTRLQ7Z7A1 2325 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 hCG_1818297A0A087WSY0 165 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 A0A096LNT2 108 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 TRBC2A0A5B9 178 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SYCE3A1L190 88 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MACROD2A1Z1Q3 448 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 TMEM89A2RUT3 159 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 PABPN1LA6NDY0 278 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 C17orf105B2RV13 164 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 FAM157AC9JC47 383 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CD3EAPO15446 510 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 EMC8O43402 210 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SSX4O60224 188 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CTNSO60931 367 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ACSL3O95573 720 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 FTCDO95954 541 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SERPINC1P01008 464 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SOD3P08294 240 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 DANCRP0C864 163 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MPC1LP0DKB6 136 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CDH1P12830 882 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 TNNT1P13805 278 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 USF1P22415 310 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ADRA1DP25100 572 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 DEKP35659 375 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SLCO1A2P46721 670 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RAB38P57729 211 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RAB8AP61006 207 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 STXBP1P61764 594 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RAB1AP62820 205 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CCZ1BP86790 482 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CCZ1P86791 482 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 STX4Q12846 297 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 BIKQ13323 160 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RIN1Q13671 783 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SEMA3AQ14563 771 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RPS6KA2Q15349 733 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 CNN3Q15417 329 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 NTRK2Q16620 822 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 KBTBD12Q3ZCT8 623 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MIDNQ504T8 468 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ACSBG2Q5FVE4 666 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 DCST1Q5T197 706 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RNF220Q5VTB9 566 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 LRRC8EQ6NSJ5 796 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MRNIPQ6NTE8 343 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 AAGABQ6PD74 315 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 DARS2Q6PI48 645 aaKnown RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF474Q6S9Z5 364 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 LCTLQ6UWM7 567 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 MICALCLQ6ZW33 695 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 BBS12Q6ZW61 710 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SLC29A4Q7RTT9 530 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SDCCAG8Q86SQ7 713 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-220ENST00000544550 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ARIH2OSQ8N7S6 290 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 ABHD11Q8NFV4 315 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 OR10G3Q8NGC4 313 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 OR1J4Q8NGS1 313 aa3.67□□□□□ -1.82
SNHG1-220ENST00000544550 SLC2A12Q8TD20 617 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms