RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 SF3B4Q15427 424 aaKnown RBP eCLIP17.13■□□□□ 0.33
TDG-208ENST00000544060 EIPR1Q53HC9 387 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 CT45A2Q5DJT8 189 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 WIPI1Q5MNZ9 446 aaPredicted RBP17.13■□□□□ 0.33
TDG-208ENST00000544060 IKBIPQ70UQ0 350 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 WDR53Q7Z5U6 358 aaPredicted RBP17.13■□□□□ 0.33
TDG-208ENST00000544060 YRDCQ86U90 279 aaKnown RBP17.13■□□□□ 0.33
TDG-208ENST00000544060 CLYBLQ8N0X4 340 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 ACBD4Q8NC06 268 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 FAM83FQ8NEG4 500 aaPredicted RBP17.13■□□□□ 0.33
TDG-208ENST00000544060 SLC35A4Q96G79 324 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 ADOQ96SZ5 270 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 TREX2Q9BQ50 279 aaPredicted RBP17.13■□□□□ 0.33
TDG-208ENST00000544060 TRMOQ9BU70 441 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 SERHLQ9NQF3 203 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 HCFC1P51610 2035 aa17.13■□□□□ 0.33
TDG-208ENST00000544060 HSPB2A8KAH6 182 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 TRIM13O60858 407 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 IGFBP2P18065 325 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 PTGDSP41222 190 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 MC3RP41968 323 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 VSNL1P62760 191 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 MRPS22P82650 360 aaKnown RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 HSPB2Q16082 182 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 SLC25A35Q3KQZ1 300 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 ACSF3Q4G176 576 aaPredicted RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 VASNQ6EMK4 673 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 TMEM107Q6UX40 140 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 NPSR1Q6W5P4 371 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
TDG-208ENST00000544060 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 ABTB1Q969K4 478 aaPredicted RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 NTNG2Q96CW9 530 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 METTL2AQ96IZ6 378 aaKnown RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 GATA5Q9BWX5 397 aaPredicted RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 UGT2B28Q9BY64 529 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 PRDM14Q9GZV8 571 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 LRTM1Q9HBL6 345 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 C1orf109Q9NX04 203 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 MKS1Q9NXB0 559 aa17.12■□□□□ 0.33
TDG-208ENST00000544060 EXO1Q9UQ84 846 aaKnown RBP17.12■□□□□ 0.33
TDG-208ENST00000544060 ARHGAP21Q5T5U3 1957 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 FREM3P0C091 2139 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 A0A087WV62 115 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 TSPAN2O60636 221 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 CBR3O75828 277 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 NUDT17P0C025 328 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 NEFHP12036 1026 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 BMP7P18075 431 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 PRPH2P23942 346 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 NHSL2Q5HYW2 709 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 SH2D4BQ5SQS7 431 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 TRABD2AQ86V40 505 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 LACC1Q8IV20 430 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 DMRTC2Q8IXT2 367 aaPredicted RBP17.11■□□□□ 0.33
TDG-208ENST00000544060 OR14L1PQ8NHC6 308 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.11■□□□□ 0.33
TDG-208ENST00000544060 SLC24A3Q9HC58 644 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
TDG-208ENST00000544060 TAS2R7Q9NYW3 318 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 WIF1Q9Y5W5 379 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
TDG-208ENST00000544060 CSMD1Q96PZ7 3565 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 PDZD2O15018 2839 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 EPPINO95925 133 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 ACTL6AO96019 429 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 PNLIPRP2P54317 469 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 PRSS53Q2L4Q9 553 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 LIX1LQ8IVB5 337 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 BANPQ8N9N5 519 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 GFM2Q969S9 779 aaKnown RBP17.1■□□□□ 0.33
TDG-208ENST00000544060 EFHD2Q96C19 240 aaPredicted RBP17.1■□□□□ 0.33
TDG-208ENST00000544060 AMDHD1Q96NU7 426 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 GLIPR2Q9H4G4 154 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 MCCC2Q9HCC0 563 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 CCL27Q9Y4X3 112 aa17.1■□□□□ 0.33
TDG-208ENST00000544060 DVL2O14641 736 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 PDPK1O15530 556 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 SPAG7O75391 227 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 IL2RAP01589 272 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 ALDH3A1P30838 453 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 RPL38P63173 70 aaKnown RBP17.09■□□□□ 0.33
TDG-208ENST00000544060 MYBPHQ13203 477 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 RCAN2Q14206 197 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 ZNHIT3Q15649 155 aaPredicted RBP17.09■□□□□ 0.33
TDG-208ENST00000544060 DCST1Q5T197 706 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 KANK2Q63ZY3 851 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 EMBQ6PCB8 327 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 SEM1Q6ZVN7 128 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 PLCZ1Q86YW0 608 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 DDIASQ8IXT1 998 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 WDSUB1Q8N9V3 476 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 TNIP2Q8NFZ5 429 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 OR4N2Q8NGD1 307 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 EGLN2Q96KS0 407 aa17.09■□□□□ 0.33
TDG-208ENST00000544060 TRIB1Q96RU8 372 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms