RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZHX2Q9Y6X8 837 aa3.14□□□□□ -1.91
SCFD1-207ENST00000544052 COL1A1P02452 1464 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-207ENST00000544052 ALPK3Q96L96 1907 aa3.14□□□□□ -1.91
SCFD1-207ENST00000544052 EME2A4GXA9 379 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SLCO1B7G3V0H7 640 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SH2D1BO14796 132 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 CSDE1O75534 798 aaKnown RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SCGB2A1O75556 95 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 AK1P00568 194 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 CCND2P30279 289 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 NPY2RP49146 381 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 MYBPC1Q00872 1141 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 MAP2K1Q02750 393 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 DPYSQ14117 519 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 GCKRQ14397 625 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 KNOP1Q1ED39 458 aaKnown RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 RFTN2Q52LD8 501 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 AK9Q5TCS8 1911 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 FOCADQ5VW36 1801 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ZER1Q7Z7L7 766 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 OR2T6Q8NHC8 308 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SYT15Q9BQS2 421 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 TEX10Q9NXF1 929 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 EPS15L1Q9UBC2 864 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 KIAA0100Q14667 2235 aaKnown RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 IGHV3-20A0A0C4DH32 117 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 PRR23AA6NEV1 266 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 NR5A2O00482 541 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF749O43361 778 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 TNFSF12O43508 249 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 LANCL1O43813 399 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 NXPH4O95158 308 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 FHP07954 510 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ZSCAN5DPP0CG00 497 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 RPS12P25398 132 aaKnown RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ALDH3B1P43353 468 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SLC6A8P48029 635 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ABCE1P61221 599 aaKnown RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 RIGQ13278 110 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ZFP69Q49AA0 526 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 CCDC152Q4G0S7 254 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 HSP90AA5PQ58FG0 334 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 TCHHL1Q5QJ38 904 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 BEND3Q5T5X7 828 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 IL23RQ5VWK5 629 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 STEAP1BQ6NZ63 245 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 FRRS1Q6ZNA5 592 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ERASQ7Z444 233 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 AMZ2Q86W34 360 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 CHDHQ8NE62 594 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 FAM71CQ8NEG0 241 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 TMEM37Q8WXS4 190 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 MCHR2Q969V1 340 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SYAP1Q96A49 352 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ATXN7L3BQ96GX2 97 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ACCSQ96QU6 501 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 TSPAN18Q96SJ8 248 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 NMNAT2Q9BZQ4 307 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 NACA2Q9H009 215 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 ECT2Q9H8V3 914 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 MYOZ2Q9NPC6 264 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 MIOXQ9UGB7 285 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 SLC6A5Q9Y345 797 aa3.13□□□□□ -1.91
SCFD1-207ENST00000544052 LOC390937A0A1W2PQ73 354 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 NEDD8-MDP1E9PL57 170 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 F8WDY8 70 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 K7EQD1 137 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 APRTP07741 180 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 CD1DP15813 335 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 IL4RP24394 825 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF131P52739 623 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 SNX1Q13596 522 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 SLC17A1Q14916 467 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 KCNMB4Q86W47 210 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 NUP37Q8NFH4 326 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 OR52B6Q8NGF0 335 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 SLCO2A1Q92959 643 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 USP28Q96RU2 1077 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 PUS3Q9BZE2 481 aaKnown RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 POLE3Q9NRF9 147 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF175Q9Y473 711 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 RNF215Q9Y6U7 377 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 PLXNB2O15031 1838 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 DOCK1Q14185 1865 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF724A8MTY0 619 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TMCO5BA8MYB1 307 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 APBB3O95704 486 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 HPRP00739 348 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 IGLV1-44P01699 117 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 MBL2P11226 248 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 RALAP11233 206 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 CYP2F1P24903 491 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TMOD1P28289 359 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 RAG2P55895 527 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TRA2BP62995 288 aaKnown RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 PMP22Q01453 160 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 NME3Q13232 169 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms