RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SGCZQ96LD1 299 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 YIPF4Q9BSR8 244 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 INPP5KQ9BT40 448 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 DEPPQ9NTK1 212 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 RYDENQ9NUL5 291 aaKnown RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 GPATCH2Q9NW75 528 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 KLHL14Q9P2G3 628 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 KLF13Q9Y2Y9 288 aaPredicted RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 CHCHD2Q9Y6H1 151 aaPredicted RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 RNF103-CHMP3A0A140T963 221 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 GXYLT2A0PJZ3 443 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 SLC28A2O43868 658 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 NKX2-2O95096 273 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 RASAL1O95294 804 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 C1QCP02747 245 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 NAGAP17050 411 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 CDKN2CP42773 168 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 GNGT1P63211 74 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 IRX1P78414 480 aaPredicted RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 TLE1Q04724 770 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 RCAN2Q14206 197 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 LASP1Q14847 261 aaKnown RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 ZNHIT3Q15649 155 aaPredicted RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 BLOC1S3Q6QNY0 202 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 SULF2Q8IWU5 870 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 CDRT4Q8N9R6 151 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 SLC16A11Q8NCK7 471 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 GOT1L1Q8NHS2 421 aaPredicted RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 CPT1CQ8TCG5 803 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 GRHL3Q8TE85 626 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 PAQR8Q8TEZ7 354 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 C10orf82Q8WW14 230 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 SLC9A6Q92581 669 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 HGDQ93099 445 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 SLC52A3Q9NQ40 469 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 SERHLQ9NQF3 203 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 ASF1BQ9NVP2 202 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 CNOT11Q9UKZ1 510 aaKnown RBP13.88□□□□□ -0.19
CD9-210ENST00000543916 TRIM33Q9UPN9 1127 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 OR10H1Q9Y4A9 318 aa13.88□□□□□ -0.19
CD9-210ENST00000543916 PINLYPA6NC86 204 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 CAPN14A8MX76 684 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 NR5A2O00482 541 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PEX1O43933 1283 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 TSPAN2O60636 221 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 UGT2B11O75310 529 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 REM1O75628 298 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 CAPN3P20807 821 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 UQCRC2P22695 453 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 GABRA3P34903 492 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PIGAP37287 484 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PRIM2P49643 509 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 MEOX1P50221 254 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 DUSP5Q16690 384 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 AGKQ53H12 422 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PRAMEF20Q5VT98 475 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 METTL21CQ5VZV1 264 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SLC22A10Q63ZE4 541 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 BICRALQ6AI39 1079 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 MSANTD1Q6ZTZ1 278 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 C6orf120Q7Z4R8 191 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 FBXW8Q8N3Y1 598 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
CD9-210ENST00000543916 OR2M7Q8NG81 312 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SPPL2AQ8TCT8 520 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 GPR151Q8TDV0 419 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PIK3R3Q92569 461 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 JADE3Q92613 823 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SLC35A4Q96G79 324 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 FRMD6Q96NE9 622 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PANX1Q96RD7 426 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SERHL2Q9H4I8 314 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 PROK2Q9HC23 129 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 Q9N2J8 555 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SLC6A13Q9NSD5 602 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 SACM1LQ9NTJ5 587 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 CBLCQ9ULV8 474 aa13.87□□□□□ -0.19
CD9-210ENST00000543916 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
CD9-210ENST00000543916 CCDC154A6NI56 674 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 OR6C70A6NIJ9 312 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 TTC36A6NLP5 189 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 TP53I11O14683 189 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 IGKV1D-16P01601 117 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 P04436 131 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 GSNP06396 782 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 ALOX5P09917 674 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 CNR1P21554 472 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 DRD4P21917 467 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 IL12BP29460 328 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 RFC3P40938 356 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 DNASE1L1P49184 302 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 MAN2A2P49641 1150 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 KCNK10P57789 538 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms