RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ALDH3B2P48448 385 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 PITPNAQ00169 270 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.455e-7■■■■□ 25.2
TUBGCP2-210ENST00000543663 EIPR1Q53HC9 387 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 MANEALQ5VSG8 457 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 PLAG1Q6DJT9 500 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 LAX1Q8IWV1 398 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 KLHDC8AQ8IYD2 350 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 RPLP0P6Q8NHW5 317 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZMYND19Q96E35 227 aaPredicted RBP12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 RC3H2Q9HBD1 1191 aaKnown RBP12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 TREM1Q9NP99 234 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 HRASLS2Q9NWW9 162 aa12.26□□□□□ -0.45
TUBGCP2-210ENST00000543663 WASH4PA8MWX3 477 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ITGA10O75578 1167 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR3A3P47888 321 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR3A2P47893 321 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 NRIP1P48552 1158 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CSNK1DP48730 415 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 LHX8Q68G74 356 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 LIPIQ6XZB0 460 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 UBE2Q1Q7Z7E8 422 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR4K14Q8NGD5 310 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR52E2Q8NGJ4 325 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 MAELQ96JY0 434 aaKnown RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 DPYSL5Q9BPU6 564 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 NIPSNAP1Q9BPW8 284 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 GORASP2Q9H8Y8 452 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SYNPO2LQ9H987 977 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CHMP1AQ9HD42 196 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 AQP9O43315 295 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 HPGDSO60760 199 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CYP17A1P05093 508 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OSMP13725 252 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 HMGA1P17096 107 aaKnown RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CXCR1P25024 350 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 GGT2P36268 569 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 COX20Q5RI15 118 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ANKRD54Q6NXT1 300 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 C1orf94Q6P1W5 598 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 PNCKQ6P2M8 343 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SBSNQ6UWP8 590 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 DENND6BQ8NEG7 585 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF480Q8WV37 535 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF471Q9BX82 626 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CLEC2LP0C7M8 214 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 MC3RP41968 323 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SLC6A9P48067 706 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OC90Q02509 493 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 C6orf132Q5T0Z8 1188 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 METTL2BQ6P1Q9 378 aaKnown RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SPRED1Q7Z699 444 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CADM3Q8N126 398 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 OR56A1Q8NGH5 318 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CLMPQ9H6B4 373 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 CPNE5Q9HCH3 593 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 BTNL2Q9UIR0 455 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SMLR1H3BR10 107 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SOX1O00570 391 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 DNAJB5O75953 348 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 PLGP00747 810 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 APEX1P27695 318 aaKnown RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 HOXC8P31273 242 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 ERVFC1P60507 584 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 NDUFA9Q16795 377 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 TP53I3Q53FA7 332 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 TMEFF1Q8IYR6 380 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SDR16C5Q8N3Y7 309 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 FTMTQ8N4E7 242 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 KLF16Q9BXK1 252 aaPredicted RBP12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 MGAT4CQ9UBM8 478 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 SH2B3Q9UQQ2 575 aa12.25□□□□□ -0.45
TUBGCP2-210ENST00000543663 LAMA2P24043 3122 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 FXYD1O00168 92 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 KMOO15229 486 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 LYRM1O43325 122 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 LIPCP11150 499 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ULK3Q6PHR2 472 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ERN2Q76MJ5 926 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 SLC39A11Q8N1S5 342 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 TSACCQ96A04 125 aaPredicted RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 ZNF689Q96CS4 500 aaPredicted RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 S100A16Q96FQ6 103 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 C11orf49Q9H6J7 331 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 KCMF1Q9P0J7 381 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 NCOR1O75376 2440 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 TRBV4-1A0A0J9YWV2 114 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 A0A0X1KG70 313 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 POM121CA8CG34 1229 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 GPR37L1O60883 481 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 PRKRAO75569 313 aaKnown RBP12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 SCGB1D2O95969 90 aa12.24□□□□□ -0.45
TUBGCP2-210ENST00000543663 PTTG1O95997 202 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms