RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MTMR10Q9NXD2 777 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NAALAD2Q9Y3Q0 740 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF254O75437 659 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 GADD45AP24522 165 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 FNTBP49356 437 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM174Q8WUU8 243 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TANKQ92844 425 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NEIL2Q969S2 332 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 BIRC7Q96CA5 298 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HDAC8Q9BY41 377 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PITHD1Q9GZP4 211 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CRLF2Q9HC73 371 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TM9SF3Q9HD45 589 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CD320Q9NPF0 282 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 STARD5Q9NSY2 213 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 C17orf113A0A1B0GUU1 675 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF879B4DU55 563 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SRPX2O60687 465 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ARL6IP5O75915 188 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 STAG3L3P0CL85 134 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HMGA1P17096 107 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 IL12AP29459 219 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 FMO3P31513 532 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TPMTP51580 245 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HK3P52790 923 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 RRADP55042 308 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 GRIK2Q13002 908 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 RPE65Q16518 533 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF789Q5FWF6 425 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MANEAQ5SRI9 462 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CARD17Q5XLA6 110 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PLET1Q6UQ28 207 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ARFGAP1Q8N6T3 406 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CDRT4Q8N9R6 151 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 OR2L3Q8NG85 312 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CREB3L4Q8TEY5 395 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC6A18Q96N87 628 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MYADMQ96S97 322 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 FKBP7Q9Y680 259 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SCN9AQ15858 1988 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SH3PXD2BA1X283 911 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NOTOA8MTQ0 251 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 H3BNX3 289 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 J3QLW9 94 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MT-ND5P03915 603 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 C1SP09871 688 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF19P17023 458 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CRYZQ08257 329 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 C18orf21Q32NC0 220 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CCDC58Q4VC31 144 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PYHIN1Q6K0P9 492 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SYNPOQ8N3V7 929 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 GNPDA2Q8TDQ7 276 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ERMAPQ96PL5 475 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 OSBPL7Q9BZF2 842 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PIGUQ9H490 435 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 KAT8Q9H7Z6 458 aaKnown RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 GPN1Q9HCN4 374 aaPredicted RBP6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ACSL6Q9UKU0 697 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TIAM2Q8IVF5 1701 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PAPPA2Q9BXP8 1791 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CIDEAO60543 219 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 KDM4BO94953 1096 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CPNE6O95741 557 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HTR1AP08908 422 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CCR7P32248 378 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 BMI1P35226 326 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF77Q15935 545 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 AFMIDQ63HM1 303 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 RPL13AP3Q6NVV1 102 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 KCNIP4Q6PIL6 250 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 HMGN2P46Q86SG4 172 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 CROCCP3Q8IVE0 287 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PNPLA1Q8N8W4 532 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ACOT4Q8N9L9 421 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 OR5T1Q8NG75 326 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 NSMAFQ92636 917 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SGTBQ96EQ0 304 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TCTN2Q96GX1 697 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 MS4A4EQ96PG1 132 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 ACTRT3Q9BYD9 372 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 KATNBL1Q9H079 304 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 BRF2Q9HAW0 419 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 C5AR2Q9P296 337 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 GNG8Q9UK08 70 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC6A14Q9UN76 642 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 FLVCR2Q9UPI3 526 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 DNAJC15Q9Y5T4 150 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 PTGDR2Q9Y5Y4 395 aa6.54□□□□□ -1.36
SRGAP1-206ENST00000543397 TAF1P21675 1872 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 MYH7P12883 1935 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 HTR3EA5X5Y0 456 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 HSPA12AO43301 675 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 H6PDO95479 791 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 TCN2P20062 427 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 ERVPABLB-1P60509 514 aa6.53□□□□□ -1.36
SRGAP1-206ENST00000543397 PMPCAQ10713 525 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms