RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 KCNE3Q9Y6H6 103 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 ENPP4Q9Y6X5 453 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 DNAH14Q0VDD8 3507 aa8.71□□□□□ -1.02
GNE-206ENST00000543356 COL5A1P20908 1838 aaPredicted RBP8.71□□□□□ -1.02
GNE-206ENST00000543356 IGHV5-10-1A0A0J9YXX1 117 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SOX30O94993 753 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DIRAS1O95057 198 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 H6PDO95479 791 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CT62P0C5K7 136 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 TNFRSF1BP20333 461 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 MYF6P23409 242 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CAPGP40121 348 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 MAP3K8P41279 467 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CHN2P52757 468 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SH3BGRP55822 239 aaPredicted RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 DAB2P98082 770 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SERTAD2Q14140 314 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 ARHGAP11BQ3KRB8 267 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SCAIQ8N9R8 606 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SLC16A11Q8NCK7 471 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 LSM14AQ8ND56 463 aaKnown RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 SIMC1Q8NDZ2 872 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CHDHQ8NE62 594 aaPredicted RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 CDS1Q92903 461 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DGAT2Q96PD7 388 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 PIP5K1AQ99755 562 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 GTPBP2Q9BX10 602 aaKnown RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 PINK1Q9BXM7 581 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 AMBRA1Q9C0C7 1298 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SLC38A1Q9H2H9 487 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DUSP22Q9NRW4 184 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 LANCL2Q9NS86 450 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SRPK3Q9UPE1 567 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 MYOCOSA0A1B0GUC4 107 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 A0A1B0GX78 115 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SNAP29O95721 258 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CBX7O95931 251 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 AK1P00568 194 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 ALOX5P09917 674 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 RHCEP18577 417 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 RRM2P31350 389 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 OR1E2P47887 323 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 ADARB1P78563 741 aaKnown RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 PUM1Q14671 1186 aaKnown RBP eCLIP8.7□□□□□ -1.02
GNE-206ENST00000543356 LPAL2Q16609 132 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DUSP5Q16690 384 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 RFX4Q33E94 735 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 KCTD21Q4G0X4 260 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DGAT2L6Q6ZPD8 337 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 HS3ST5Q8IZT8 346 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 DHRSXQ8N5I4 330 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 OR4C15Q8NGM1 316 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 RIT1Q92963 219 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 CCDC74BQ96LY2 380 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 RSPO3Q9BXY4 272 aaPredicted RBP8.7□□□□□ -1.02
GNE-206ENST00000543356 ALOXE3Q9BYJ1 711 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 SMURF2Q9HAU4 748 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 ADAP2Q9NPF8 381 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 KCND3Q9UK17 655 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 LYVE1Q9Y5Y7 322 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 U3KQV3 271 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 PI4KAP42356 2102 aa8.7□□□□□ -1.02
GNE-206ENST00000543356 A8MVJ9 347 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 SYT5O00445 386 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ALBP02768 609 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ALPPP05187 535 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 S1PR1P21453 382 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 BTG2P78543 158 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 DUSP8Q13202 625 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 QSOX2Q6ZRP7 698 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 USP51Q70EK9 711 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 SLC9A6Q92581 669 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 RBM18Q96H35 190 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 PSD2Q9BQI7 771 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 LMF2Q9BU23 707 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 ARRDC1-AS1Q9H2J1 176 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 TRIM45Q9H8W5 580 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 ZNF304Q9HCX3 659 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 NDOR1Q9UHB4 597 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 TMEFF2Q9UIK5 374 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 MAU2Q9Y6X3 613 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 TNFRSF11BO00300 401 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 KHNYNO15037 678 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 CDC123O75794 336 aaPredicted RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 GUSBP08236 651 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 MAOAP21397 527 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ENPP1P22413 925 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 ALAS2P22557 587 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 PRKAR1BP31321 381 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 LIMS1P48059 325 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 PDX1P52945 283 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 RAD23AP54725 363 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 SPIBQ01892 262 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 CHRNEQ04844 493 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 PPP1R8Q12972 351 aaKnown RBP8.69□□□□□ -1.02
GNE-206ENST00000543356 ERV3-1Q14264 604 aa8.69□□□□□ -1.02
GNE-206ENST00000543356 EXOSC7Q15024 291 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms