RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SELENOFO60613 162 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PLIN3O60664 434 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MITFO75030 526 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 BANF1O75531 89 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TIPRLO75663 272 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PAK4O96013 591 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PLAUP00749 431 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 HLA-DQB1P01920 261 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MBPP02686 304 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ALPLP05186 524 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RPLP0P05388 317 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 GLAP06280 429 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FCER2P06734 321 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ANXA2P07355 339 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 HTR1AP08908 422 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FGF2P09038 288 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CKMT1AP12532 417 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FOLR2P14207 255 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TMEM11P17152 192 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TNNI1P19237 187 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RPS3P23396 243 aaKnown RBP eCLIP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PTAFRP25105 342 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PAX6P26367 422 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SSTR1P30872 391 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CALCRP30988 508 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ATP6V1E1P36543 226 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RFX2P48378 723 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 NRIP1P48552 1158 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC7A2P52569 658 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ARSFP54793 590 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PKNOX1P55347 436 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FKBP1AP62942 108 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CCNA1P78396 465 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RAE1P78406 368 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CSTF1Q05048 431 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SRSF1Q07955 248 aaKnown RBP eCLIP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MTAPQ13126 283 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PRKAA1Q13131 559 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FHL3Q13643 280 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PIGHQ14442 188 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 VEPH1Q14D04 833 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 HFEQ30201 348 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 DDI2Q5TDH0 399 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TMEM236Q5W0B7 351 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SEL1L3Q68CR1 1132 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 LIN54Q6MZP7 749 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 USP17L6PQ6QN14 398 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 PLET1Q6UQ28 207 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 VITQ6UXI7 678 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RTL4Q6ZR62 310 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TMEM179Q6ZVK1 233 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FAM183BPQ6ZVS7 135 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RNF130Q86XS8 419 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC22A9Q8IVM8 553 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 C12orf45Q8N5I9 185 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 LRRC17Q8N6Y2 441 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ANKRD52Q8NB46 1076 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TRPV1Q8NER1 839 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC24A4Q8NFF2 622 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SUN3Q8TAQ9 357 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ITFG1Q8TB96 612 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF431Q8TF32 576 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 CREB3L1Q96BA8 519 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 BIRC7Q96CA5 298 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RTP4Q96DX8 246 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SIPA1Q96FS4 1042 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TRMT61AQ96FX7 289 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 WBP1Q96G27 269 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 Q96MT0 163 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 FCRL5Q96RD9 977 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 NTPCRQ9BSD7 190 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 C2orf88Q9BSF0 95 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 DGCR6LQ9BY27 220 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ITPAQ9BY32 194 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 REG4Q9BYZ8 158 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 METTL9Q9H1A3 318 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MIXL1Q9H2W2 232 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 KLHL31Q9H511 634 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ANKRD19PQ9H560 264 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 DUSP21Q9H596 190 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ASB7Q9H672 318 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ESRP2Q9H6T0 727 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SEBOXQ9HB31 216 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MYOZ1Q9NP98 299 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 MED11Q9P086 117 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 RCOR3Q9P2K3 495 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SLC9A2Q9UBY0 812 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SCP2D1Q9UJQ7 156 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 C3orf18Q9UK00 162 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ADAM28Q9UKQ2 775 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 DNPEPQ9ULA0 475 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 SIRT4Q9Y6E7 314 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-206ENST00000542685 TEX264Q9Y6I9 313 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 THSD7AQ9UPZ6 1657 aa5.49□□□□□ -1.53
XRCC4-206ENST00000542685 ANKRD31Q8N7Z5 1873 aa5.48□□□□□ -1.53
XRCC4-206ENST00000542685 IGKV2D-30A0A075B6S6 120 aa5.48□□□□□ -1.53
XRCC4-206ENST00000542685 GLYATL1P3A0A0U1RQE8 302 aa5.48□□□□□ -1.53
XRCC4-206ENST00000542685 C2CD4BA6NLJ0 364 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms