RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PTGDSP41222 190 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 RPL14P50914 215 aaKnown RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 MAGOHP61326 146 aaKnown RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ADORA2A-AS1P86434 159 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 PSG6Q00889 435 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 EMX2Q04743 252 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 BST1Q10588 318 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 STX3Q13277 289 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 SNTA1Q13424 505 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 PTGR1Q14914 329 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 HHATQ5VTY9 493 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 IL23RQ5VWK5 629 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 TMEM198Q66K66 360 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 R3HCC1LQ7Z5L2 792 aaKnown RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 RIMKLAQ8IXN7 391 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 RNF138Q8WVD3 245 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 HOXB13Q92826 284 aaPredicted RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 TUBGCP3Q96CW5 907 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ZBED6CLQ96FA7 236 aaPredicted RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 TMEM41AQ96HV5 264 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ZNF597Q96LX8 424 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 COL21A1Q96P44 957 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 NODALQ96S42 347 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 DMRTA2Q96SC8 542 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 UBQLN3Q9H347 655 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ACKR4Q9NPB9 350 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 DDX18Q9NVP1 670 aaKnown RBP14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ASIC5Q9NY37 505 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 SH3BP4Q9P0V3 963 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 FREM3P0C091 2139 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 ADGRG4Q8IZF6 3080 aa14.15□□□□□ -0.14
ECHDC2-223ENST00000542552 CYSRT1A8MQ03 144 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 E9PLN8 166 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 AQP7O14520 342 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 SCAMP2O15127 329 aaKnown RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 HCN1O60741 890 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 ABCB7O75027 752 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 TPOP07202 933 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 HPCAL1P37235 193 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 RPL3P39023 403 aaKnown RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 MAP3K8P41279 467 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 C21orf58P58505 322 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 MLC1Q15049 377 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 PDCD2Q16342 344 aaPredicted RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 TIGD3Q6B0B8 471 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 SLC30A6Q6NXT4 461 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 RPTNQ6XPR3 784 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 CD163Q86VB7 1156 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 PACS2Q86VP3 889 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 SLC44A2Q8IWA5 706 aaPredicted RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 KIRREL3Q8IZU9 778 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 ANKRD42Q8N9B4 389 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 FNDC5Q8NAU1 212 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 OR4N2Q8NGD1 307 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 PHF10Q8WUB8 498 aaKnown RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 PAIP2Q9BPZ3 127 aaKnown RBP14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 VKORC1Q9BQB6 163 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 C1orf50Q9BV19 199 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 AKTIPQ9H8T0 292 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 ITPR2Q14571 2701 aa14.14□□□□□ -0.15
ECHDC2-223ENST00000542552 ICOSLGO75144 302 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 SNNO75324 88 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 REM1O75628 298 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ESRRAP11474 423 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 DDX5P17844 614 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 AGAP20933 346 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ENDOUP21128 410 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 CDK9P50750 372 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 PNLIPRP2P54317 469 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 MANFP55145 182 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ZNF155Q12901 538 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 HSPB3Q12988 150 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 MAD2L1Q13257 205 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 CYP27C1Q4G0S4 372 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 AGBL2Q5U5Z8 902 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 C3P1Q6ZMU1 363 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 MRGPRGQ86SM5 289 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ZNF808Q8N4W9 903 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 OR7A2PQ8NGA2 310 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ZFP28Q8NHY6 868 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 COQ8BQ96D53 544 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 JSRP1Q96MG2 331 aaPredicted RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 GNRHR2Q96P88 292 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 ADOQ96SZ5 270 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 LMF2Q9BU23 707 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 METTL7AQ9H8H3 244 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 PNPOQ9NVS9 261 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 B4GALT7Q9UBV7 327 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 EIF3LQ9Y262 564 aaKnown RBP14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 C15orf41Q9Y2V0 281 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 NAV2Q8IVL1 2488 aa14.13□□□□□ -0.15
ECHDC2-223ENST00000542552 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 TRGV5A0A0B4J1U4 118 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 PRAMEF25A6NGN4 478 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 TTC36A6NLP5 189 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 NPIPA2E9PIF3 369 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 NPIPA3F8WFD2 350 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 BCKDKO14874 412 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 HPNP05981 417 aa14.12□□□□□ -0.15
ECHDC2-223ENST00000542552 LAMP1P11279 417 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms