RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 FRG2CA6NGY1 282 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 H7C1Q1 480 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 TO15178 435 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 HCRTR2O43614 444 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ZIC3O60481 467 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 TSPAN2O60636 221 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 CBR3O75828 277 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 LOXP28300 417 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 TYK2P29597 1187 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 PPICP45877 212 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ALDH9A1P49189 494 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 SLC7A5Q01650 507 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 PRSS53Q2L4Q9 553 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 GGTA1PQ4G0N0 100 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 TTC19Q6DKK2 380 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF474Q6S9Z5 364 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 PLCZ1Q86YW0 608 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 C17orf53Q8N3J3 647 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 C1orf52Q8N6N3 182 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 OR9A2Q8NGT5 310 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ISL2Q96A47 359 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 STARD4Q96DR4 205 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ADOQ96SZ5 270 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 MDFIQ99750 246 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 RTN4RQ9BZR6 473 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 OPN3Q9H1Y3 402 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF395Q9H8N7 513 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 NINJ2Q9NZG7 142 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 FLRT3Q9NZU0 649 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
CLSTN3-213ENST00000541953 TRIM64A6NGJ6 449 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 TRIM64BA6NI03 449 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 OR6C70A6NIJ9 312 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 STX16O14662 325 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 ACOX3O15254 700 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 CTIFO43310 598 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 CSNK2A2P19784 350 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 DRD5P21918 477 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 SRD5A2P31213 254 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 RAE1P78406 368 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 IFT88Q13099 833 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 SNTA1Q13424 505 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 PAGE2Q7Z2X7 111 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 BTLAQ7Z6A9 289 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 GRAMD2AQ8IUY3 354 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 TMEM151AQ8N4L1 468 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 OR5M1Q8NGP8 315 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 PPP1R14CQ8TAE6 165 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 ZNF483Q8TF39 744 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 FIG4Q92562 907 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 EFHD2Q96C19 240 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 SLC35A4Q96G79 324 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 MARK4Q96L34 752 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 Q96MF0 132 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 VSTM2LQ96N03 204 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 SFXN2Q96NB2 322 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 ZFP3Q96NJ6 502 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 COL21A1Q96P44 957 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 BTBD9Q96Q07 612 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 UTP11Q9Y3A2 253 aaKnown RBP13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 CSPG4Q6UVK1 2322 aa13.98□□□□□ -0.17
CLSTN3-213ENST00000541953 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 GOLGA6L10A6NI86 522 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 CDH16O75309 829 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 REM1O75628 298 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 SMNDC1O75940 238 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 OR4F21O95013 312 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 GOSR1O95249 250 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 GRK2P25098 689 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 KIR2DL2P43627 348 aaPredicted RBP13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 HTR6P50406 440 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 SHEQ5VZ18 495 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 METTL2BQ6P1Q9 378 aaKnown RBP13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 KLC3Q6P597 504 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 ENPP6Q6UWR7 440 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 CCDC91Q7Z6B0 441 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 MILR1Q7Z6M3 343 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 UBQLNLQ8IYU4 475 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 CCDC116Q8IYX3 515 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 TRPC4APQ8TEL6 797 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 SELENOMQ8WWX9 145 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 ELOVL6Q9H5J4 265 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 ACSS3Q9H6R3 686 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 FOLH1BQ9HBA9 442 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 AHSPQ9NZD4 102 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 DKKL1Q9UK85 242 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 UTS2RQ9UKP6 389 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 CFL2Q9Y281 166 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 ROS1P08922 2347 aa13.97□□□□□ -0.17
CLSTN3-213ENST00000541953 A8MT66 165 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 MSTNO14793 375 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 SMAD7O15105 426 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 IL3P08700 152 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 DPP4P27487 766 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 PCSK6P29122 969 aa13.96□□□□□ -0.17
CLSTN3-213ENST00000541953 SIRPAP78324 504 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms