RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SH3KBP1Q96B97 665 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 OPALINQ96PE5 141 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 FAM129BQ96TA1 746 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 AIFM2Q9BRQ8 373 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 EFCAB11Q9BUY7 163 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 NLNQ9BYT8 704 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 REEP4Q9H6H4 257 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 EMC7Q9NPA0 242 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 PRSS16Q9NQE7 514 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 C14orf119Q9NWQ9 140 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 LHX3Q9UBR4 397 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4Q9UBX2 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 FTSJ1Q9UET6 329 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 KCND3Q9UK17 655 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 LSM2Q9Y333 95 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 ACTL7AQ9Y615 435 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 SESN1Q9Y6P5 492 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 IGLV3-16A0A075B6K0 115 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 EDDM13A0A1B0GTR0 161 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TRDV1A0A1B0GX56 115 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 A0A1W2PQL4 384 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 A0A1W2PRB8 838 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 FLRT2O43155 660 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 LYRM1O43325 122 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 AKAP8O43823 692 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 TPST2O60704 377 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ICMTO60725 284 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TBX19O60806 448 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 PEX14O75381 377 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TNFRSF21O75509 655 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 SERPINI2O75830 405 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 DNTTP04053 509 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ARAFP10398 606 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 UQCRC2P22695 453 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 AOAHP28039 575 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHFR-219ENST00000541341 CHI3L1P36222 383 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 CRYBB2P43320 205 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 AFF3P51826 1226 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 SMSP52788 366 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 WNT3P56703 355 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 WNT4P56705 351 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ST8SIA6P61647 398 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 PITPNAQ00169 270 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ZNF763Q0D2J5 394 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 CARTPTQ16568 116 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 WSCD2Q2TBF2 565 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ZNF628Q5EBL2 1059 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 FBXO48Q5FWF7 155 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 FAM209AQ5JX71 171 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ANKRD34AQ69YU3 496 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ZNF730Q6ZMV8 503 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 USP30Q70CQ3 517 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TMPRSS7Q7RTY8 843 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 GLRX5Q86SX6 157 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 PHC2Q8IXK0 858 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 OR2AP1Q8NGE2 309 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 CLHC1Q8NHS4 586 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 BAHD1Q8TBE0 780 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 HCAR2Q8TDS4 363 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 OTUB1Q96FW1 271 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 ZNF764Q96H86 408 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 SLC6A18Q96N87 628 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 SLC38A2Q96QD8 506 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 HBEGFQ99075 208 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 BARD1Q99728 777 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 ZNF717Q9BY31 904 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.81□□□□□ -0.842e-7■□□□□ 11.3
CHFR-219ENST00000541341 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 TRIM39Q9HCM9 518 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 HHATLQ9HCP6 504 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 FARSBQ9NSD9 589 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 SNTG1Q9NSN8 517 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ACER3Q9NUN7 267 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 MED17Q9NVC6 651 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ASB6Q9NWX5 421 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 AKAP7Q9P0M2 348 aaPredicted RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 SERGEFQ9UGK8 458 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 ICKQ9UPZ9 632 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 SPEF1Q9Y4P9 236 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 PCDHGC4Q9Y5F7 938 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 KCNE2Q9Y6J6 123 aa9.81□□□□□ -0.84
CHFR-219ENST00000541341 GCN1Q92616 2671 aaKnown RBP9.81□□□□□ -0.84
CHFR-219ENST00000541341 URB1O60287 2271 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 A0A1W2PP55 124 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 OR5K3A6NET4 321 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 K7ERQ8 282 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 CDRT1O95170 752 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 CSF3P09919 207 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 ZNF30P17039 623 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 CDKN1CP49918 316 aaPredicted RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 XKP51811 444 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 MAPK12P53778 367 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 SRP54P61011 504 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms