RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PROX1Q92786 737 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ARSGQ96EG1 525 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 NRBF2Q96F24 287 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF347Q96SE7 839 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 FEVQ99581 238 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 NIPSNAP1Q9BPW8 284 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 PIGUQ9H490 435 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 RIBC2Q9H4K1 309 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 CTPS2Q9NRF8 586 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 FGF21Q9NSA1 209 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC6A14Q9UN76 642 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 A4GNTQ9UNA3 340 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 NUP210LQ5VU65 1888 aa11.43□□□□□ -0.58
AP003559.1-201ENST00000540906 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PRR33A8MZF0 331 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 E9PQ18 207 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ADAMDEC1O15204 470 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 GDF9O60383 454 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 BCAS1O75363 584 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SERPINB7O75635 380 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 LINGO3P0C6S8 592 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 RHCEP18577 417 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 EMDP50402 254 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 EMP3P54852 163 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PLAURQ03405 335 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 STX4Q12846 297 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 MAP4K2Q12851 820 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ANGPT1Q15389 498 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 FIGNL1Q6PIW4 674 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 CCDC71Q8IV32 467 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 GALNT12Q8IXK2 581 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ST13P4Q8IZP2 240 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF786Q8N393 782 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 OR10G2Q8NGC3 310 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 IFI44Q8TCB0 444 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 GIPC3Q8TF64 312 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SGCDQ92629 289 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 HOXB13Q92826 284 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SDF2Q99470 211 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 YIPF2Q9BWQ6 316 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 LRRN3Q9H3W5 708 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC22A11Q9NSA0 550 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SEC16AO15027 2179 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PEX12O00623 359 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 IGKV1D-16P01601 117 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ALPPP05187 535 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ALOX5P09917 674 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ATP6V1B1P15313 513 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 IL7RP16871 459 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 STT3AP46977 705 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF155Q12901 538 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SQSTM1Q13501 440 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF267Q14586 743 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 MICAQ29983 383 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 VWA2Q5GFL6 755 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF311Q5JNZ3 666 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ATAD3BQ5T9A4 648 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 RNF220Q5VTB9 566 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PRAMEF8Q5VWM4 474 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PRAMEF7Q5VXH5 474 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF770Q6IQ21 691 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 NPSR1Q6W5P4 371 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 KRT73Q86Y46 540 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PRSS58Q8IYP2 241 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 NLGN4XQ8N0W4 816 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ATG16L2Q8NAA4 619 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC38A9Q8NBW4 561 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PIK3C3Q8NEB9 887 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 RIT1Q92963 219 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 CCDC74BQ96LY2 380 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 RDH12Q96NR8 316 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ARHGDIGQ99819 225 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 MESP1Q9BRJ9 268 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 FUZQ9BT04 418 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 LRFN3Q9BTN0 628 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 BTBD2Q9BX70 525 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PINK1Q9BXM7 581 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF350Q9GZX5 532 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 NMNAT1Q9HAN9 279 aaPredicted RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 FOLH1BQ9HBA9 442 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 DNAAF2Q9NVR5 837 aaKnown RBP11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PDP2Q9P2J9 529 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ACAD8Q9UKU7 415 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 ERVK-19Q9WJR5 959 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 LIPT1Q9Y234 373 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 PCDHGA8Q9Y5G5 932 aa11.42□□□□□ -0.58
AP003559.1-201ENST00000540906 GPR179Q6PRD1 2367 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 LOC100130705A0A1B0GUX0 176 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 A8MUA0 341 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 GADD45GO95257 159 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 CPNE6O95741 557 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 TFAP2AP05549 437 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms