RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 DEPDC7Q96QD5 511 aa12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 FYTTD1Q96QD9 318 aaKnown RBP12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 ARHGDIGQ99819 225 aa12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 ARHGAP9Q9BRR9 750 aa12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 RANGRFQ9HD47 186 aaPredicted RBP12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 POLMQ9NP87 494 aaPredicted RBP12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 ZDHHC4Q9NPG8 344 aa12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 SEMA4GQ9NTN9 838 aa12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
PRICKLE3-205ENST00000540849 A0A0G2JPF8 293 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 ANKRD34BA5PLL1 514 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CPSF4LA6NMK7 179 aaKnown RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 HNRNPCL2B2RXH8 293 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 HNRNPCL3B7ZW38 293 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 RFXAPO00287 272 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 HNRNPCL4P0DMR1 293 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 MYL9P24844 172 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 BCL6P41182 706 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CLEC12AQ5QGZ9 265 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CD200R1LQ6Q8B3 271 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TMEM107Q6UX40 140 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 VRK2Q86Y07 508 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 OR8K5Q8NH50 307 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CNRIP1Q96F85 164 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CAMK1GQ96NX5 476 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 RNF121Q9H920 327 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 A0A1W2PR48 441 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 OTOL1A6NHN0 477 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TIMP1P01033 207 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 C8orf89P0DMQ9 161 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 VIPR2P41587 438 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 SLC1A3P43003 542 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TSPAN31Q12999 210 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 COL9A2Q14055 689 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 SLC9A5Q14940 896 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TMEM35AQ53FP2 167 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 RASSF6Q6ZTQ3 369 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 ABI3BPQ7Z7G0 1075 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 GLCCI1Q86VQ1 547 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 LSRQ86X29 649 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 CCDC116Q8IYX3 515 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TTLQ8NG68 377 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 OR4Q3Q8NH05 313 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 DIO2Q92813 273 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 FERD3LQ96RJ6 166 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 BEX2Q9BXY8 128 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 PAQR5Q9NXK6 330 aaPredicted RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 DEC1Q9P2X7 70 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 MRPS23Q9Y3D9 190 aaKnown RBP12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 ATG4BQ9Y4P1 393 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 ASB4Q9Y574 426 aa12.47□□□□□ -0.41
PRICKLE3-205ENST00000540849 TRDV1A0A1B0GX56 115 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 C1QTNF3-AMACRE9PGA6 284 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 HPGDSO60760 199 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 NCR1O76036 304 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 AIFM1O95831 613 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 CH25HO95992 272 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 GNSP15586 552 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 TRHRP34981 398 aaPredicted RBP12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 OMPP47874 163 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 CDH11P55287 796 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 PPP3R1P63098 170 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 PRDX1Q06830 199 aaKnown RBP12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 TRAM2Q15035 370 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 ZIC1Q15915 447 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 ZNF311Q5JNZ3 666 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 LCN1P1Q5VSP4 162 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 CNIH2Q6PI25 160 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 POGLUT1Q8NBL1 392 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 NR4A3Q92570 626 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 TRIM43Q96BQ3 446 aaPredicted RBP12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 ZG16BQ96DA0 208 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 OR7D2Q96RA2 312 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 INSM2Q96T92 566 aaPredicted RBP12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 TMEM246Q9BRR3 403 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 SLC38A1Q9H2H9 487 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 SLC13A4Q9UKG4 626 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 NTNG1Q9Y2I2 539 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 CHST2Q9Y4C5 530 aa12.46□□□□□ -0.41
PRICKLE3-205ENST00000540849 SHISA3A0PJX4 238 aa12.46□□□□□ -0.42
PRICKLE3-205ENST00000540849 IGLON5A6NGN9 336 aa12.46□□□□□ -0.42
PRICKLE3-205ENST00000540849 CASKO14936 926 aa12.46□□□□□ -0.42
PRICKLE3-205ENST00000540849 ERI3O43414 337 aaKnown RBP12.46□□□□□ -0.42
PRICKLE3-205ENST00000540849 SCO2O43819 266 aa12.46□□□□□ -0.42
PRICKLE3-205ENST00000540849 ACP5P13686 325 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms