RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 DEFB127Q9H1M4 99 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 PNO1Q9NRX1 252 aaKnown RBP8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 NMRK1Q9NWW6 199 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 LYARQ9NX58 379 aaKnown RBP8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZDHHC2Q9UIJ5 367 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF223Q9UK11 482 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 CES1P1Q9UKY3 287 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 PPIEQ9UNP9 301 aaKnown RBP8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 TRAF6Q9Y4K3 522 aa8.13□□□□□ -1.11
TRAPPC1-202ENST00000540486 TGP01266 2768 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 A0A1B0GVC2 190 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 TMEM120BA0PK00 339 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SAGE2PA6NJ88 616 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 NPIPB8E9PQR5 432 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 LYPLA1O75608 230 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SASH3O75995 380 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 MYO1DO94832 1006 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 GPR75O95800 540 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 AIFM1O95831 613 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 LINC00032P0C843 101 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SOX18P35713 384 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SERPINB5P36952 375 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 MAPK12P53778 367 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SLC18A1P54219 525 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 TNFRSF17Q02223 184 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ASPHQ12797 758 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 STX4Q12846 297 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 CHI3L2Q15782 390 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PRSS53Q2L4Q9 553 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF750Q32MQ0 723 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 C1orf185Q5T7R7 199 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 AGBL2Q5U5Z8 902 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 KANK2Q63ZY3 851 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 GALNT18Q6P9A2 607 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PAGE2Q7Z2X7 111 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 HDXQ7Z353 690 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF321PQ8N8H1 164 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ANKRD42Q8N9B4 389 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 RELL2Q8NC24 303 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SORT1Q99523 831 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 CCL19Q99731 98 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZDHHC11Q9H8X9 412 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 LRTM1Q9HBL6 345 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 HEY2Q9UBP5 337 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF629Q9UEG4 869 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PHF11Q9UIL8 331 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 MCM8Q9UJA3 840 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 MRPS33Q9Y291 106 aaKnown RBP8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 FIS1Q9Y3D6 152 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 SPACA6W5XKT8 324 aa8.12□□□□□ -1.11
TRAPPC1-202ENST00000540486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ACOT7O00154 380 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 CD5LO43866 347 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 PRKNO60260 465 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 CRCPO75575 148 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 IGHG3P01860 377 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 IFNA16P05015 189 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 SERPINE1P05121 402 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 BGNP21810 368 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 BMP5P22003 454 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 PRPH2P23942 346 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 BUD31P41223 144 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 MAP2K3P46734 347 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 STT3AP46977 705 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ABCE1P61221 599 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 PPIAP62937 165 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 TRA2BP62995 288 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 SERTAD2Q14140 314 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 POU4F3Q15319 338 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ELAVL1Q15717 326 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 RFTN2Q52LD8 501 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 TTMPQ5BVD1 217 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 SH2D4BQ5SQS7 431 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 WLSQ5T9L3 541 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 FAM180BQ6P0A1 224 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 SLC48A1Q6P1K1 146 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 RNF165Q6ZSG1 346 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 B3GNT7Q8NFL0 401 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 AGR3Q8TD06 166 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF721Q8TF20 911 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ROBO4Q8WZ75 1007 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 C3orf30Q96M34 536 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 EML4Q9HC35 981 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ADAP2Q9NPF8 381 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 YAE1D1Q9NRH1 226 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ACAD8Q9UKU7 415 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 EXO1Q9UQ84 846 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 EIF3LQ9Y262 564 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 DLGAP4Q9Y2H0 992 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 PCDHGB3Q9Y5G1 929 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ABCA1O95477 2261 aa8.11□□□□□ -1.11
TRAPPC1-202ENST00000540486 ZNF407Q9C0G0 2248 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms