RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ACKR4Q9NPB9 350 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 DHCR7Q9UBM7 475 aaKnown RBP10.52□□□□□ -0.73
PBX1-212ENST00000540236 GTF2IRD1Q9UHL9 959 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 WDR45Q9Y484 360 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 TRBV4-1A0A0J9YWV2 114 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 TNFRSF10BO14763 440 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 MATN3O15232 486 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 PLA2G10O15496 165 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 MPC2O95563 127 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 NKPD1Q17RQ9 610 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 TCEAL6Q6IPX3 200 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 NPRL2Q8WTW4 380 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 GPR137Q96N19 417 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 MGME1Q9BQP7 344 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 SLC6A13Q9NSD5 602 aa10.52□□□□□ -0.73
PBX1-212ENST00000540236 NRCAMQ92823 1304 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 IGKV6D-41A0A0C4DH26 115 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CHP2O43745 196 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CXCR4P61073 352 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CHIT1Q13231 466 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ACTBL2Q562R1 376 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 LSRQ86X29 649 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 CDH26Q8IXH8 852 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 MAML2Q8IZL2 1156 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 OR52L1Q8NGH7 329 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF408Q9H9D4 720 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 BABAM2Q9NXR7 383 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 AKAP7Q9P0M2 348 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 FBXW11Q9UKB1 542 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 AIPO00170 330 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 STK25O00506 426 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 PBX3P40426 434 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 PON3Q15166 354 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 SSX1Q16384 188 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 HFEQ30201 348 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 TECPR1Q7Z6L1 1165 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 TTC9Q92623 222 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 SLC6A7Q99884 636 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CD244Q9BZW8 370 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 METTL8Q9H825 291 aaKnown RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ELF5Q9UKW6 265 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 SCML2Q9UQR0 700 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 DERAQ9Y315 318 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF487B1APH4 448 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 BET1O15155 118 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 RPN2P04844 631 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 PCGF3Q3KNV8 242 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 OR10K2Q6IF99 312 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 LRRTM1Q86UE6 522 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 MFSD8Q8NHS3 518 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 SULT4A1Q9BR01 284 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF251Q9BRH9 671 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 MROH6A6NGR9 719 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 LANCL1O43813 399 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 KRT33AO76009 404 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 UBCP0CG48 685 aaKnown RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF30P17039 623 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 NME2P22392 152 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ACER2Q5QJU3 275 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 TMPRSS11BQ86T26 416 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 KCNH6Q9H252 994 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 EGLN3Q9H6Z9 239 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 DLL4Q9NR61 685 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZFP57Q9NU63 452 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 C2orf42Q9NWW7 574 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 AKAP11Q9UKA4 1901 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 LATS1O95835 1130 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 H1F0P07305 194 aaKnown RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 DAOP14920 347 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 PTGFRP43088 359 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 WNT4P56705 351 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 RHEBQ15382 184 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZBTB2Q8N680 514 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 BVESQ8NE79 360 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 DUSP19Q8WTR2 217 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 PTP4A1Q93096 173 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ARL11Q969Q4 196 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 TEFMQ96QE5 360 aaKnown RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 DUSP21Q9H596 190 aa10.51□□□□□ -0.73
PBX1-212ENST00000540236 ZNF70Q9UC06 446 aaPredicted RBP10.51□□□□□ -0.73
PBX1-212ENST00000540236 A0A0B4J293 547 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 BLOC1S5-TXNDC5H3BN57 136 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 K7EPK0 472 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 DPYSL4O14531 572 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
PBX1-212ENST00000540236 PTHLHP12272 177 aa10.5□□□□□ -0.73
PBX1-212ENST00000540236 LSSP48449 732 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms