RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MED26O95402 600 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 EGFP01133 1207 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 ZNF888P0CJ79 500 aaPredicted RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 F3P13726 295 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TRA2BP62995 288 aaKnown RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 RHAGQ02094 409 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PRKCDQ05655 676 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 NCF4Q15080 339 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TJAP1Q5JTD0 557 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TMEM201Q5SNT2 666 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 MRM1Q6IN84 353 aaKnown RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SLC48A1Q6P1K1 146 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 FAM111BQ6SJ93 734 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 GDPD3Q7L5L3 318 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 NKAIN4Q8IVV8 208 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 LAX1Q8IWV1 398 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 OR8H2Q8N162 312 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 OR9Q1Q8NGQ5 310 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 BBS10Q8TAM1 723 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 GATAD2BQ8WXI9 593 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TSACCQ96A04 125 aaPredicted RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 CEP19Q96LK0 163 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PRRC1Q96M27 445 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 MND1Q9BWT6 205 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 RAB11FIP5Q9BXF6 653 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 S1PR5Q9H228 398 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SLC38A1Q9H2H9 487 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TOR4AQ9NXH8 423 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 NDOR1Q9UHB4 597 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 RBMX2Q9Y388 322 aaKnown RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PEX16Q9Y5Y5 336 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 FAM170BA6NMN3 283 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 LOC110117498-PIK3R3F6TDL0 507 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PROM1O43490 865 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PIP5K1CO60331 668 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 CSNK2A2P19784 350 aaPredicted RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PDX1P52945 283 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 NKX2-5P52952 324 aaPredicted RBP10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SMIM11AP58511 58 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 ZNF45Q02386 682 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TFF2Q03403 129 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SELENBP1Q13228 472 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 TMEM35AQ53FP2 167 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SPANXN2Q5MJ10 180 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 PHC2Q8IXK0 858 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 ELP4Q96EB1 424 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SAP130Q9H0E3 1048 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 SMURF1Q9HCE7 757 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 F5P12259 2224 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 CEP290O15078 2479 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 COL4A2P08572 1712 aa10.8□□□□□ -0.68
C11orf54-214ENST00000540113 CENPVL1A0A0U1RR11 272 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 PRSS38A1L453 326 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ZNF860A6NHJ4 632 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 POM121CA8CG34 1229 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CACNB4O00305 520 aaPredicted RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CDRT1O95170 752 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 KLF8O95600 359 aaPredicted RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 FHP07954 510 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 DDX5P17844 614 aaKnown RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 GPR4P46093 362 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CDK5Q00535 292 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 OCLNQ16625 522 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CCNJQ5T5M9 372 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 MEDAGQ5VYS4 303 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 C22orf42Q6IC83 251 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SLC30A6Q6NXT4 461 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 C1orf94Q6P1W5 598 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 TUBA3EQ6PEY2 450 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ENPP7Q6UWV6 458 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CCDC190Q86UF4 302 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SLC16A11Q8NCK7 471 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 LCN9Q8WX39 176 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 OR1E3Q8WZA6 343 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SLC35A4Q96G79 324 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 POLDIP3Q9BY77 421 aaKnown RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 RACGAP1Q9H0H5 632 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 TMEM165Q9HC07 324 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ANKMY1Q9P2S6 941 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 MUTYHQ9UIF7 546 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CFL2Q9Y281 166 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SPIN1Q9Y657 262 aaPredicted RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SNPHO15079 494 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 EMC8O43402 210 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SLITRK5O94991 958 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ALPPP05187 535 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 HOXB2P14652 356 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 PSMA1P25786 263 aaKnown RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CMPK1P30085 196 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SOX18P35713 384 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CAV3P56539 151 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 TIMM50Q3ZCQ8 353 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ZNF425Q6IV72 752 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 CCBE1Q6UXH8 406 aaPredicted RBP10.79□□□□□ -0.68
C11orf54-214ENST00000540113 B3GLCTQ6Y288 498 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 ZNF730Q6ZMV8 503 aa10.79□□□□□ -0.68
C11orf54-214ENST00000540113 C16orf62Q7Z3J2 963 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms