RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FBXW10Q5XX13 1052 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 SLC48A1Q6P1K1 146 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 C9orf40Q8IXQ3 194 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 GOLM1Q8NBJ4 401 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 OR4K14Q8NGD5 310 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 RAB3IL1Q8TBN0 382 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 ZNF721Q8TF20 911 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 ARL8AQ96BM9 186 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 TM4SF18Q96CE8 201 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 SENP5Q96HI0 755 aaPredicted RBP13.68□□□□□ -0.22
USB1-203ENST00000539737 EBPLQ9BY08 206 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 PSME2Q9UL46 239 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.68□□□□□ -0.22
USB1-203ENST00000539737 WBP11Q9Y2W2 641 aaKnown RBP13.68□□□□□ -0.22
USB1-203ENST00000539737 TMED5Q9Y3A6 229 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 CCL27Q9Y4X3 112 aa13.68□□□□□ -0.22
USB1-203ENST00000539737 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 HMGB1P1B2RPK0 211 aaPredicted RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 PIP5K1BO14986 540 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 WDR1O75083 606 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 SEC22BO75396 215 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 LYPLA1O75608 230 aaPredicted RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 IL3P08700 152 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 LINC00032P0C843 101 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 SLC35E2P0CK97 266 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 ADSLP30566 484 aaPredicted RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 SLC1A6P48664 564 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 ALDH9A1P49189 494 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 ZNF136P52737 540 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 KCNJ2P63252 427 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 STX3Q13277 289 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 MPEG1Q2M385 716 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 SPRED3Q2MJR0 410 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 UGT3A2Q3SY77 523 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 DCST1Q5T197 706 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 CLEC9AQ6UXN8 241 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 IKBIPQ70UQ0 350 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 DND1Q8IYX4 353 aaKnown RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 SAMD14Q8IZD0 417 aaPredicted RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 SLC15A4Q8N697 577 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 NUBPLQ8TB37 319 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 C16orf78Q8WTQ4 265 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 SARAFQ96BY9 339 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 KLHL29Q96CT2 875 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 TUBB1Q9H4B7 451 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 MYNNQ9NPC7 610 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 DLGAP4Q9Y2H0 992 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 SLC6A5Q9Y345 797 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 RAP2CQ9Y3L5 183 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 POLR3HQ9Y535 204 aaPredicted RBP13.67□□□□□ -0.22
USB1-203ENST00000539737 PTGDR2Q9Y5Y4 395 aa13.67□□□□□ -0.22
USB1-203ENST00000539737 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 C15orf38-AP3S2A0A0A6YYH1 394 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 SYT5O00445 386 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 LSM1O15116 133 aaKnown RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 PGRMC2O15173 223 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 SKAP2O75563 359 aaPredicted RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 RAF1P04049 648 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 CPMP14384 443 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 MAPK1P28482 360 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 PCSK6P29122 969 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 SOX18P35713 384 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 RPL38P63173 70 aaKnown RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 BST1Q10588 318 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 KEAP1Q14145 624 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 ZNF267Q14586 743 aaPredicted RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 ZNF791Q3KP31 576 aaPredicted RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 ACSF3Q4G176 576 aaPredicted RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 TTMPQ5BVD1 217 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 XKR7Q5GH72 579 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 HLA-DQA1Q5Y7H0 255 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 ATG16L1Q676U5 607 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 RNF111Q6ZNA4 994 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 FAM13CQ8NE31 585 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 OR2T11Q8NH01 316 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 CDC26Q8NHZ8 85 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 RIT1Q92963 219 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
USB1-203ENST00000539737 UCN3Q969E3 161 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 FBXL20Q96IG2 436 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 PPP3R2Q96LZ3 170 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 GAL3ST4Q96RP7 486 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 SH2D2AQ9NP31 389 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 GIMAP4Q9NUV9 329 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 HAO1Q9UJM8 370 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 UTS2RQ9UKP6 389 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 ZNF780BQ9Y6R6 833 aa13.66□□□□□ -0.22
USB1-203ENST00000539737 A0A1W2PS29 197 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms