RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 BTN3A2P78410 334 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 LARS2Q15031 903 aaKnown RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TMEM201Q5SNT2 666 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SFTPA2Q8IWL1 248 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SLC16A11Q8NCK7 471 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 OR14C36Q8NHC7 312 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 HOXD1Q9GZZ0 328 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SLC38A1Q9H2H9 487 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 CSNK1G3Q9Y6M4 447 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SPTBP11277 2137 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 A0A1W2PQL4 384 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SHISA3A0PJX4 238 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 HYKKA2RU49 373 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 HRO43593 1189 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SLITRK5O94991 958 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 FCARP24071 287 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 MAGEA8P43361 318 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 OR2B6P58173 313 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 PSPHP78330 225 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TFF2Q03403 129 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 NCF4Q15080 339 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TIMM50Q3ZCQ8 353 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 FAM131AQ6UXB0 335 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 KRT73Q86Y46 540 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SLC30A8Q8IWU4 369 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TBX5Q99593 518 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 HDHD5Q9BXW7 423 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 HDAC8Q9BY41 377 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 MED20Q9H944 212 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-210ENST00000539599 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 ENOPH1Q9UHY7 261 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 SLC9A8Q9Y2E8 581 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
UBE3B-210ENST00000539599 TSPAN19P0C672 248 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 IL7P13232 177 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 SDHBP21912 280 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 RORCP51449 518 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 FABP5Q01469 135 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 SRSF5Q13243 272 aaKnown RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 PDGFRLQ15198 375 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF730Q6ZMV8 503 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 FGF11Q92914 225 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 TEX101Q9BY14 249 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 TP63Q9H3D4 680 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 FGF22Q9HCT0 170 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 THAP10Q9P2Z0 257 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 PLEKHB1Q9UF11 243 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 KLHL3Q9UH77 587 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 SSR3Q9UNL2 185 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 A3GALT2U3KPV4 340 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 A0A1W2PQU0 124 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 RAB36O95755 333 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 RPN2P04844 631 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 TRIM23P36406 574 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 KHKP50053 298 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 SIM1P81133 766 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 CDK5Q00535 292 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 PROKR2Q8NFJ6 384 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 POLDIP3Q9BY77 421 aaKnown RBP13.19□□□□□ -0.3
UBE3B-210ENST00000539599 COMMD3Q9UBI1 195 aa13.19□□□□□ -0.3
UBE3B-210ENST00000539599 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 POM121BA6NF01 834 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 CLEC3AO75596 197 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ASGR2P07307 311 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 PKLRP30613 574 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 IGFALSP35858 605 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-210ENST00000539599 C6orf183Q5T699 404 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 FCRLBQ6BAA4 426 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 GALNT12Q8IXK2 581 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 CDS1Q92903 461 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 FBXO34Q9NWN3 711 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms