RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ABCB7O75027 752 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 ERN1O75460 977 aaKnown RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 REM1O75628 298 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 BCAS2O75934 225 aaPredicted RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 URI1O94763 535 aaPredicted RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 SUPT7LO94864 414 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RCBTB2O95199 551 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 GOSR1O95249 250 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 ATE1O95260 518 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 ESRRBO95718 433 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RAF1P04049 648 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 SNRPAP09012 282 aaKnown RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CT45A8P0DMV1 189 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CT45A9P0DMV2 189 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 SRD5A2P31213 254 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 HTR6P50406 440 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 LHX2P50458 406 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CORO7P57737 925 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RAE1P78406 368 aaKnown RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 SRYQ05066 204 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 FOXD4Q12950 439 aaPredicted RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CT45A2Q5DJT8 189 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 TEX35Q5T0J7 233 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 ENPP6Q6UWR7 440 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 PLXDC2Q6UX71 529 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 NPSR1Q6W5P4 371 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 GPRIN3Q6ZVF9 776 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CAMKMTQ7Z624 323 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 IFNEQ86WN2 208 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 TRIM42Q8IWZ5 723 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CCDC116Q8IYX3 515 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 OR9A2Q8NGT5 310 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RDH11Q8TC12 318 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RNF138Q8WVD3 245 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 KAT2AQ92830 837 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 EXOSC8Q96B26 276 aaKnown RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 C16orf45Q96MC5 204 aaPredicted RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 VSTM2LQ96N03 204 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 ADOQ96SZ5 270 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 TM9SF2Q99805 663 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 PFDN4Q9NQP4 134 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 TAS2R10Q9NYW0 307 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 TMEM216Q9P0N5 145 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 CLCF1Q9UBD9 225 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 FBXL2Q9UKC9 423 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 DLGAP4Q9Y2H0 992 aa11.36□□□□□ -0.59
VAMP1-206ENST00000538970 RPH3AQ9Y2J0 694 aaPredicted RBP11.36□□□□□ -0.59
VAMP1-206ENST00000538970 EXOC1LA0A1B0GW35 172 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 GNG14A0A1W2PPG7 69 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 B4DXG7 233 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 DLX3O60479 287 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 TSPAN2O60636 221 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 ULK1O75385 1050 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 NME6O75414 186 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 CTAGE8P0CG41 777 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 ZNF708P17019 499 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 TAC1P20366 129 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 GCAP28676 217 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 HMOX2P30519 316 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 STARP49675 285 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 CLDN18P56856 261 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 PSPHP78330 225 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 LTBQ06643 244 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 EFR3AQ14156 821 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 SPIN4Q56A73 249 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 FBXW10Q5XX13 1052 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 TIFABQ6ZNK6 161 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 LUZP2Q86TE4 346 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 CTAGE4Q8IX94 777 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 SAMD14Q8IZD0 417 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 METTL6Q8TCB7 284 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 WNT2BQ93097 391 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 C11orf24Q96F05 449 aaPredicted RBP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 APIPQ96GX9 242 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 SMR3AQ99954 134 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 RBM24Q9BX46 236 aaKnown RBP11.35□□□□□ -0.59
VAMP1-206ENST00000538970 PLEKHF2Q9H8W4 249 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 FOLH1BQ9HBA9 442 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 AKAP6Q13023 2319 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 FREM3P0C091 2139 aa11.35□□□□□ -0.59
VAMP1-206ENST00000538970 VPS13CQ709C8 3753 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 FLNAP21333 2647 aaKnown RBP11.34□□□□□ -0.59
VAMP1-206ENST00000538970 KIAA1324LA8MWY0 1029 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-206ENST00000538970 PLOD2O00469 737 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 HCRTR2O43614 444 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 PLOD3O60568 738 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 HRGP04196 525 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 ABHD2P08910 425 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 CHMP24386 653 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 ATP5F1P24539 256 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-206ENST00000538970 GRK2P25098 689 aa11.34□□□□□ -0.59
VAMP1-206ENST00000538970 IL12BP29460 328 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms