RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 EP300Q09472 2414 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-207ENST00000538862 IGLON5A6NGN9 336 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 GUCY1B2O75343 617 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 IL1AP01583 271 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 CPEP16870 476 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 DRD1P21728 446 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 CXCL12P48061 93 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDCA3-207ENST00000538862 SMSP52788 366 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ARFIP1P53367 373 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 DMWDQ09019 674 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 TMPRSS11AQ6ZMR5 421 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 USP30Q70CQ3 517 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 SZRD1Q7Z422 152 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 BCDIN3DQ7Z5W3 292 aaKnown RBP13.66□□□□□ -0.22
CDCA3-207ENST00000538862 IQCF1Q8N6M8 205 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 RPLP0P6Q8NHW5 317 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ASB15Q8WXK1 588 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ZNF582Q96NG8 517 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-207ENST00000538862 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 OR2A14Q96R47 310 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 C17orf62Q9BQA9 187 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 PINK1Q9BXM7 581 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 HOXD1Q9GZZ0 328 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ZDHHC4Q9NPG8 344 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 GRIP1Q9Y3R0 1128 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 V9GYH0 126 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 FAM186AA6NE01 2351 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 TRPM6Q9BX84 2022 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 SNTNA6NMZ2 147 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 RGS5O15539 181 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 EPPINO95925 133 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 EPHX1P07099 455 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 TEAD1P28347 426 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 NBL1P41271 181 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 IL12RB1P42701 662 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 RAB28P51157 221 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 PSPHP78330 225 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 AGERQ15109 404 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 C2orf27AQ580R0 203 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ACSM5Q6NUN0 579 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ZNF793Q6ZN11 406 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 IQCHQ86VS3 1027 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 CLDN22Q8N7P3 220 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 OR6T1Q8NGN1 323 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 OR2A1Q8NGT9 310 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 TRMT61AQ96FX7 289 aaKnown RBP13.66□□□□□ -0.22
CDCA3-207ENST00000538862 CAMK1GQ96NX5 476 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 RAB11FIP5Q9BXF6 653 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 AICDAQ9GZX7 198 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 FGF20Q9NP95 211 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-207ENST00000538862 ISYNA1Q9NPH2 558 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 SNTG1Q9NSN8 517 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 FBXO4Q9UKT5 387 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 TBC1D24Q9ULP9 559 aa13.66□□□□□ -0.22
CDCA3-207ENST00000538862 CFAP54Q96N23 3096 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 IGKV1-8A0A0C4DH67 115 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 K7EQS6 105 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 SERPIND1P05546 499 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 CHRM4P08173 479 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 TDGF1P13385 188 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 IFNGR2P38484 337 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 ARPC4P59998 168 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 RAB40BQ12829 278 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 LARS2Q15031 903 aaKnown RBP13.65□□□□□ -0.22
CDCA3-207ENST00000538862 CARTPTQ16568 116 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 LIPKQ5VXJ0 399 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 NANOGNBQ7Z5D8 188 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 GPR151Q8TDV0 419 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 NACC2Q96BF6 587 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 LRR1Q96L50 414 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 INSM2Q96T92 566 aaPredicted RBP13.65□□□□□ -0.22
CDCA3-207ENST00000538862 C14orf119Q9NWQ9 140 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 THAP10Q9P2Z0 257 aaPredicted RBP13.65□□□□□ -0.22
CDCA3-207ENST00000538862 POU2F3Q9UKI9 436 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 FBXW2Q9UKT8 454 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 CKAP5Q14008 2032 aa13.65□□□□□ -0.22
CDCA3-207ENST00000538862 A0A0G2JN53 185 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 SYT5O00445 386 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 PPM1DO15297 605 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 KAT7O95251 611 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 NR2F6P10588 404 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 ACP2P11117 423 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 MAN2A2P49641 1150 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 WNT4P56705 351 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 FUT5Q11128 374 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
CDCA3-207ENST00000538862 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
CDCA3-207ENST00000538862 PAQR6Q6TCH4 344 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms