RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DMRT3Q9NQL9 472 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SRP9P49458 86 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 RAG2P55895 527 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC36A2Q495M3 483 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 CCSMST1Q4G0I0 132 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 ZDHHC20Q5W0Z9 365 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 KIAA0907Q7Z7F0 614 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 ST8SIA4Q92187 359 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 ERMAPQ96PL5 475 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SECISBP2Q96T21 854 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SAP130Q9H0E3 1048 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 OR51B5Q9H339 312 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 MIEF1Q9NQG6 463 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 TAAR2Q9P1P5 351 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 CSNK1G3Q9Y6M4 447 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 ANKDD1BA6NHY2 528 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 HRO43593 1189 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 MTX2O75431 263 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 NFATC1O95644 943 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 IGSF6O95976 241 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SYPP08247 313 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 IL3P08700 152 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 NPR2P20594 1047 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 CDH11P55287 796 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 GSG1Q2KHT4 349 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 PYHIN1Q6K0P9 492 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 HS6ST3Q8IZP7 471 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 SAMD12Q8N8I0 201 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 OR2T4Q8NH00 348 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 OR52N1Q8NH53 320 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 OVCA2Q8WZ82 227 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 MAN2C1Q9NTJ4 1040 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 KCNMB2Q9Y691 235 aa17.51■□□□□ 0.39
SFSWAP-207ENST00000538548 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ANHXE9PGG2 379 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 TGFB1P01137 390 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 CATP04040 527 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 KLK1P06870 262 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 RAB8AP61006 207 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 IER5LQ5T953 404 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 LYPD4Q6UWN0 246 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 LIPIQ6XZB0 460 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 MORN4Q8NDC4 146 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 OR4F15Q8NGB8 312 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 RAB8BQ92930 207 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 RFKQ969G6 155 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 EGLN3Q9H6Z9 239 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 TRPM5Q9NZQ8 1165 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 FAM8A1Q9UBU6 413 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ZFR2Q9UPR6 939 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 NPTNQ9Y639 398 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 CKAP5Q14008 2032 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 RGS9O75916 674 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 UBXN7O94888 489 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 GIFP27352 417 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 EPHA4P54764 986 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 VSX2P58304 361 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 LSM11P83369 360 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 CRYZQ08257 329 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 SREBF2Q12772 1141 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ST3GAL2Q16842 350 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF791Q3KP31 576 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 CHMP1BQ7LBR1 199 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 FBXO15Q8NCQ5 510 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 OR10Z1Q8NGY1 313 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 C2orf15Q8WU43 125 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 RIT1Q92963 219 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 LINC00052Q96N35 136 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ABHD1Q96SE0 405 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 ZNF649Q9BS31 505 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 CACNG6Q9BXT2 260 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 SHARPINQ9H0F6 387 aa17.5■□□□□ 0.39
SFSWAP-207ENST00000538548 SLC28A2O43868 658 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 EOMESO95936 686 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 NUP62P37198 522 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 IL20RBQ6UXL0 311 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 TOMM5Q8N4H5 51 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 OR2T35Q8NGX2 323 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SPRYD4Q8WW59 207 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 MS4A3Q96HJ5 214 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 KLF16Q9BXK1 252 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SDHAF2Q9NX18 166 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 PTGFRNQ9P2B2 879 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 M0R3H8 397 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 DVL2O14641 736 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 NDUFA2O43678 99 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 MMP20O60882 483 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SOX30O94993 753 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 AKR1A1P14550 325 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 UGT2B7P16662 529 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 LCN1P31025 176 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 THBS2P35442 1172 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 RPL6Q02878 288 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 SLBPQ14493 270 aaKnown RBP eCLIP17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 TBC1D19Q8N5T2 526 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 BMPERQ8N8U9 685 aa17.49■□□□□ 0.39
SFSWAP-207ENST00000538548 UXS1Q8NBZ7 420 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms