RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PRAMEF20Q5VT98 475 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ULK3Q6PHR2 472 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 PLET1Q6UQ28 207 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ENPP6Q6UWR7 440 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 PLCZ1Q86YW0 608 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 NAGSQ8N159 534 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 UTP23Q9BRU9 249 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 CCDC106Q9BWC9 280 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ITPAQ9BY32 194 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 C1orf21Q9H246 121 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ANKRA2Q9H9E1 313 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CXorf21Q9HAI6 301 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CD93Q9NPY3 652 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 RNF215Q9Y6U7 377 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 METTL21EPA6NDL7 271 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 NARSO43776 548 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 CDRT1O95170 752 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CKMT1AP12532 417 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ZNF35P13682 527 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 CLCA4Q14CN2 919 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 THOC7Q6I9Y2 204 aaKnown RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 SLC27A4Q6P1M0 643 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 KCTD18Q6PI47 426 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 VASH1Q7L8A9 365 aaPredicted RBP5.07□□□□□ -1.6
LRP6-203ENST00000538239 FOXRED2Q8IWF2 684 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 MFSD9Q8NBP5 474 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 LKAAEAR1Q8TD35 194 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 LINC01599Q8WXQ3 324 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 ANKRD10Q9NXR5 420 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 SSC5DA1L4H1 1573 aa5.07□□□□□ -1.6
LRP6-203ENST00000538239 PRAMEF33A0A0G2JMD5 474 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ACOX3O15254 700 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PRAMEF10O60809 474 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PEX14O75381 377 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 NDUFV2P19404 249 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC5A2P31639 672 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 POU3F4P49335 361 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 RIDAP52758 137 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 RRADP55042 308 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CHRNEQ04844 493 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 GPR19Q15760 415 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 MEX3DQ86XN8 651 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 SLC15A3Q8IY34 581 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 SYT14Q8NB59 555 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 OR13J1Q8NGT2 312 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 C9orf43Q8TAL5 461 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 MED28Q9H204 178 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 TEX13CA0A0J9YWL9 993 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ISPDA4D126 451 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 M0R3H8 397 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 UGDHO60701 494 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CXCL10P02778 98 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 HOXD8P13378 290 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 MAPK3P27361 379 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 CPOXP36551 454 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 HERV-K104P61576 105 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ADAM17P78536 824 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 HSD11B2P80365 405 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ARHGAP19Q14CB8 494 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 BCL2L15Q5TBC7 163 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 RPL13AP3Q6NVV1 102 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ADAMTSL4Q6UY14 1074 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CDH24Q86UP0 819 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CDRT4Q8N9R6 151 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TBC1D20Q96BZ9 403 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 KATNBL1Q9H079 304 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 LIN28AQ9H9Z2 209 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 PCDHB16Q9NRJ7 776 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TREX1Q9NSU2 369 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 BOKQ9UMX3 212 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 EXOSC1Q9Y3B2 195 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 HS3ST3A1Q9Y663 406 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 PRRT4C9JH25 899 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 K7ESM1 405 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 FMO6PO60774 539 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PSKH1P11801 424 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 RHCEP18577 417 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PRDX3P30048 256 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 CDH15P55291 814 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 APOFQ13790 326 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 KCNAB1Q14722 419 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 CCNJQ5T5M9 372 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ERMP1Q7Z2K6 904 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 WBP2Q969T9 261 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 DGCR14Q96DF8 476 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 EDEM2Q9BV94 578 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 DPH1Q9BZG8 443 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ZNF701Q9NV72 531 aaPredicted RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 CBLCQ9ULV8 474 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 C14orf166Q9Y224 244 aaKnown RBP5.06□□□□□ -1.6
LRP6-203ENST00000538239 PEX16Q9Y5Y5 336 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ABCA3Q99758 1704 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 H3BUI4 141 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 ABLIM1O14639 778 aa5.06□□□□□ -1.6
LRP6-203ENST00000538239 FRS3O43559 492 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms