RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 FCHO1O14526 889 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 EMC8O43402 210 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 DYRK3O43781 588 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 NKX2-2O95096 273 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 CPSF4O95639 269 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 HMGN2P05204 90 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 SP1P08047 785 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 DRD5P21918 477 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 S100A3P33764 101 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SOAT1P35610 550 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 PIGAP37287 484 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 DNASE1L1P49184 302 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 CYB561P49447 251 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 ATP4BP51164 291 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 POLR2JP52435 117 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 PRKAG1P54619 331 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 GNGT1P63211 74 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 LASP1Q14847 261 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 TLR1Q15399 786 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 C6orf163Q5TEZ5 329 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 FNDC7Q5VTL7 733 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 ZNF324BQ6AW86 544 aaPredicted RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 BLOC1S3Q6QNY0 202 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SZRD1Q7Z422 152 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SLC44A2Q8IWA5 706 aaPredicted RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 MIER2Q8N344 545 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 CISD2Q8N5K1 135 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 TMEM156Q8N614 296 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 C7orf57Q8NEG2 295 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 OR5D16Q8NGK9 328 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 OR5L2Q8NGL0 311 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 OR4A15Q8NGL6 344 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 GOT1L1Q8NHS2 421 aaPredicted RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 EFHD2Q96C19 240 aaPredicted RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 CHMP6Q96FZ7 201 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 AURKBQ96GD4 344 aaPredicted RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 BARD1Q99728 777 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 ATAD3AQ9NVI7 634 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 ASF1BQ9NVP2 202 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHFR-216ENST00000538235 HPF1Q9NWY4 346 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 FAM120CQ9NX05 1096 aaKnown RBP12.03□□□□□ -0.48
CHFR-216ENST00000538235 TAS2R9Q9NYW1 312 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SLC25A37Q9NYZ2 338 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 CCDC167Q9P0B6 97 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 KLHL14Q9P2G3 628 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 BTNL2Q9UIR0 455 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 SNX8Q9Y5X2 465 aa12.03□□□□□ -0.48
CHFR-216ENST00000538235 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.48
CHFR-216ENST00000538235 TRBV5-3A0A0A0MS03 114 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 TRAV17A0A0B4J275 112 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 RNF103-CHMP3A0A140T963 221 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 PRSS51A0A1B0GVH4 220 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 FAM234BA2RU67 622 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 COQ9O75208 318 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 PPM1BO75688 479 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SLITRK5O94991 958 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 CCT3P49368 545 aaKnown RBP12.02□□□□□ -0.49
CHFR-216ENST00000538235 TLE1Q04724 770 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 FOXO1Q12778 655 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 TP53BP2Q13625 1128 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SQLEQ14534 574 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 MAPK11Q15759 364 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 IGFBP7Q16270 282 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 COX20Q5RI15 118 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 CCNJQ5T5M9 372 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SAXO2Q658L1 398 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SLC25A25Q6KCM7 469 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.02□□□□□ -0.49
CHFR-216ENST00000538235 HPS6Q86YV9 775 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SIAH3Q8IW03 269 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SULF2Q8IWU5 870 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SLC34A3Q8N130 599 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 BCORP1Q8N888 145 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SLC22A8Q8TCC7 542 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SFXN5Q8TD22 340 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 GRHL3Q8TE85 626 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 PAQR8Q8TEZ7 354 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 TM9SF4Q92544 642 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 GTF2H4Q92759 462 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 CDS1Q92903 461 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SLC35A4Q96G79 324 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 OR52E6Q96RD3 313 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 TRIM8Q9BZR9 551 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.49
CHFR-216ENST00000538235 TSPAN10Q9H1Z9 355 aaPredicted RBP12.02□□□□□ -0.49
CHFR-216ENST00000538235 IKZF5Q9H5V7 419 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 SAR1AQ9NR31 198 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 TUBA8Q9NY65 449 aaPredicted RBP12.02□□□□□ -0.49
CHFR-216ENST00000538235 PRODH2Q9UF12 536 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 ANAPC2Q9UJX6 822 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
CHFR-216ENST00000538235 HIVEP3Q5T1R4 2406 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 NPIPA5A0A0B4J1W7 369 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 NPIPA7E9PJI5 369 aa12.01□□□□□ -0.49
CHFR-216ENST00000538235 FBP2O00757 339 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms