RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 SLC30A4O14863 429 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 RGS13O14921 159 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 UBXN7O94888 489 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 PCDH8O95206 1070 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 CH25HO95992 272 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 CSF2P04141 144 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 SOX18P35713 384 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 IL12RB1P42701 662 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 HOXC5Q00444 222 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 FABP5Q01469 135 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 UBE3AQ05086 875 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 C18orf63Q68DL7 685 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 VRK2Q86Y07 508 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 ZNF513Q8N8E2 541 aaPredicted RBP12.3□□□□□ -0.44
LGR5-202ENST00000536515 SPPL3Q8TCT6 385 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
LGR5-202ENST00000536515 FGF20Q9NP95 211 aaPredicted RBP12.3□□□□□ -0.44
LGR5-202ENST00000536515 MBNL1Q9NR56 388 aaKnown RBP12.3□□□□□ -0.44
LGR5-202ENST00000536515 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.3□□□□□ -0.44
LGR5-202ENST00000536515 CDH23Q9H251 3354 aa12.3□□□□□ -0.44
LGR5-202ENST00000536515 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 GRXCR1A8MXD5 290 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 C1QTNF3-AMACRE9PGA6 284 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 STK25O00506 426 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
LGR5-202ENST00000536515 LIMS3P0CW19 117 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 LIMS4P0CW20 117 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ASAH1Q13510 395 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 TPBGQ13641 420 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 RAB30Q15771 203 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 PIP5KL1Q5T9C9 394 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 KIAA1161Q6NSJ0 714 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ZNF730Q6ZMV8 503 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 QSOX2Q6ZRP7 698 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 UFD1Q92890 307 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ZNF707Q96C28 371 aaPredicted RBP12.29□□□□□ -0.44
LGR5-202ENST00000536515 YIPF2Q9BWQ6 316 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 PINK1Q9BXM7 581 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 SNX7Q9UNH6 387 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 KCNK6Q9Y257 313 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 TBC1D3BA6NDS4 549 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 CCDC182A6NF36 153 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 CASC3O15234 703 aaKnown RBP12.29□□□□□ -0.44
LGR5-202ENST00000536515 LALBAP00709 142 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 DDOSTP39656 456 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ANXA11P50995 505 aaKnown RBP12.29□□□□□ -0.44
LGR5-202ENST00000536515 CHRNEQ04844 493 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 MINDY4Q4G0A6 757 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 HSDL2Q6YN16 418 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ACOT4Q8N9L9 421 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 GNPDA2Q8TDQ7 276 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 CAMK1GQ96NX5 476 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 MRPS18AQ9NVS2 196 aaKnown RBP12.29□□□□□ -0.44
LGR5-202ENST00000536515 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 NTNG1Q9Y2I2 539 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 ASB4Q9Y574 426 aa12.29□□□□□ -0.44
LGR5-202ENST00000536515 SNTNA6NMZ2 147 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 CENPXA8MT69 81 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 POLR1CO15160 346 aaPredicted RBP12.28□□□□□ -0.44
LGR5-202ENST00000536515 SNRNP200O75643 2136 aaKnown RBP12.28□□□□□ -0.44
LGR5-202ENST00000536515 AIFM1O95831 613 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 CA3P07451 260 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 HIST1H1TP22492 207 aaPredicted RBP12.28□□□□□ -0.44
LGR5-202ENST00000536515 AVPR1BP47901 424 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 RAB28P51157 221 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 RAB8AP61006 207 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 GNA13Q14344 377 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 SLC30A6Q6NXT4 461 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 BHLHB9Q6PI77 547 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 TMEM64Q6YI46 380 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 RAB42Q8N4Z0 105 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 C12orf76Q8N812 135 aaPredicted RBP12.28□□□□□ -0.44
LGR5-202ENST00000536515 GDPD1Q8N9F7 314 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 ATP6V1C2Q8NEY4 427 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 MS4A6EQ96DS6 147 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 SLC38A2Q96QD8 506 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 OR7D2Q96RA2 312 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 SNX18Q96RF0 628 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 TTYH2Q9BSA4 534 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 HDAC8Q9BY41 377 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 PBX4Q9BYU1 374 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 YBX2Q9Y2T7 364 aaKnown RBP12.28□□□□□ -0.44
LGR5-202ENST00000536515 PLEKHM1Q9Y4G2 1056 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 HMX3A6NHT5 357 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 B4DXG7 233 aa12.28□□□□□ -0.44
LGR5-202ENST00000536515 NFATC1O95644 943 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms