RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FRKP42685 505 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 ASMTP46597 345 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 CASP6P55212 293 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 PER3P56645 1201 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 CDSNQ15517 529 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 ARHGAP11AQ6P4F7 1023 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 MAMDC2Q7Z304 686 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 MARVELD2Q8N4S9 558 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 OR5M9Q8NGP3 310 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 EFHD2Q96C19 240 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 GNRHR2Q96P88 292 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 ADOQ96SZ5 270 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 SLC6A15Q9H2J7 730 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 AKTIPQ9H8T0 292 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 DDX18Q9NVP1 670 aaKnown RBP12.05□□□□□ -0.48
PRKDC-206ENST00000536429 TAS2R9Q9NYW1 312 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 FLRT3Q9NZU0 649 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 ATP6V1HQ9UI12 483 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 HAO1Q9UJM8 370 aa12.05□□□□□ -0.48
PRKDC-206ENST00000536429 A0A1B0GVC2 190 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 B4DXG7 233 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 PRRG2O14669 202 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 GNB5O14775 395 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 COQ9O75208 318 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 TRPC1P48995 793 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 RPL14P50914 215 aaKnown RBP12.04□□□□□ -0.48
PRKDC-206ENST00000536429 DIO3P55073 304 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 GAB1Q13480 694 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 NUP54Q7Z3B4 507 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 RIMKLAQ8IXN7 391 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 FBXO30Q8TB52 745 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 ZNF597Q96LX8 424 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 DMRTA2Q96SC8 542 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 NUF2Q9BZD4 464 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 UBQLN3Q9H347 655 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 METTL7AQ9H8H3 244 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 EQTNQ9NQ60 294 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 PNPLA3Q9NST1 481 aa12.04□□□□□ -0.48
PRKDC-206ENST00000536429 SIRT3Q9NTG7 399 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-206ENST00000536429 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
PRKDC-206ENST00000536429 SUCOQ9UBS9 1254 aaKnown RBP12.04□□□□□ -0.48
PRKDC-206ENST00000536429 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.04□□□□□ -0.48
PRKDC-206ENST00000536429 DNAJC13O75165 2243 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ADGRG4Q8IZF6 3080 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 NINQ8N4C6 2090 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 TRGV5A0A0B4J1U4 118 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 PRAMEF25A6NGN4 478 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 AQP7O14520 342 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ICOSLGO75144 302 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 SNNO75324 88 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 SLITRK5O94991 958 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 SNX4O95219 450 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ESRRAP11474 423 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 CYP4B1P13584 511 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GDF1P27539 372 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MAPK1P28482 360 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GPC1P35052 558 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 HPCAL1P37235 193 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MASP1P48740 699 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 PRKAG1P54619 331 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MANFP55145 182 aaKnown RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 RPP38P78345 283 aaKnown RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 EMX2Q04743 252 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GXYLT1Q4G148 440 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 TTMPQ5BVD1 217 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 TMEM198Q66K66 360 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ANGPTL8Q6UXH0 198 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 LARP4Q71RC2 724 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MRGPRGQ86SM5 289 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 GIMAP5Q96F15 307 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 OTUB1Q96FW1 271 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 TMEM41AQ96HV5 264 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 LMF2Q9BU23 707 aaKnown RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 OSBPL11Q9BXB4 747 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 LDAHQ9H6V9 325 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 ACSS1Q9NUB1 689 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MARCOQ9UEW3 520 aaPredicted RBP12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MAPRE3Q9UPY8 281 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 C15orf41Q9Y2V0 281 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 OR10H1Q9Y4A9 318 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 MAST4O15021 2626 aa12.03□□□□□ -0.48
PRKDC-206ENST00000536429 CENPEQ02224 2701 aa12.02□□□□□ -0.48
PRKDC-206ENST00000536429 GTF3C1Q12789 2109 aa12.02□□□□□ -0.48
PRKDC-206ENST00000536429 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 E9PLN8 166 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 SNPHO15079 494 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 TRAPPC6AO75865 159 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 IGKV1D-16P01601 117 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 PRPS2P11908 318 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms