RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PHF21AQ96BD5 680 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 OTULINQ96BN8 352 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ECHDC3Q96DC8 303 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 TMEM19Q96HH6 336 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SECISBP2Q96T21 854 aaKnown RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 DPYSL5Q9BPU6 564 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 KLF16Q9BXK1 252 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PLA2G12AQ9BZM1 189 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF436Q9C0F3 470 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.52□□□□□ -1.377e-8■■■■□ 20.4
CPSF7-215ENST00000536145 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SERHL2Q9H4I8 314 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ZCCHC4Q9H5U6 513 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PLEKHA1Q9HB21 404 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 BRD7Q9NPI1 651 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 DMRT3Q9NQL9 472 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 SIRT3Q9NTG7 399 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-215ENST00000536145 NUDT15Q9NV35 164 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 COPZ2Q9P299 210 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 FBXL3Q9UKT7 428 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 PADI3Q9ULW8 664 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 CHST2Q9Y4C5 530 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 VWA8A3KMH1 1905 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 ANAPC1Q9H1A4 1944 aa6.52□□□□□ -1.37
CPSF7-215ENST00000536145 HELZP42694 1942 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TRAV6A0A075B6T7 132 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LOC105369274A0A096LPK9 316 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MYADML2A6NDP7 307 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 NPIPB15A6NHN6 443 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CD8B2A6NJW9 211 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 OR5K4A6NMS3 321 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MPTX1A8MV57 137 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 KRBOX1C9JBD0 128 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 K7ERQ8 282 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ABCD4O14678 606 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TSPAN4O14817 238 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 EEF1E1O43324 174 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 COCHO43405 550 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 KLF4O43474 513 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 RNF13O43567 381 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SLC28A2O43868 658 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SELENOFO60613 162 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MMP20O60882 483 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 NME6O75414 186 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF821O75541 412 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SC5DO75845 299 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 APOL3O95236 402 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LATS1O95835 1130 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 RB1P06400 928 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CTSHP09668 335 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CD8BP10966 210 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ACP5P13686 325 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 GSTM3P21266 225 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 IMPA1P29218 277 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CORO1AP31146 461 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MTNR1AP48039 350 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 PITPNBP48739 271 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SRP9P49458 86 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MMP15P51511 669 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 BLVRAP53004 296 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 VSX2P58304 361 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 RAB14P61106 215 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LSM11P83369 360 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 E2F1Q01094 437 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TWF1Q12792 350 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 GPR17Q13304 367 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 NAE1Q13564 534 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 DYRK1AQ13627 763 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 DDX39BQ13838 428 aaKnown RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ZMYND11Q15326 602 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TMEM44Q2T9K0 475 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CCSMST1Q4G0I0 132 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CTXN3Q4LDR2 81 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF658BQ4V348 819 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ATP13A5Q4VNC0 1218 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 FAM26DQ5JW98 314 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 HECTD3Q5T447 861 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 B3GNTL1Q67FW5 361 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 MED27Q6P2C8 311 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 AGTRAPQ6RW13 159 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 ZNF322Q6U7Q0 402 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LYPD4Q6UWN0 246 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 RSPO2Q6UXX9 243 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-215ENST00000536145 B3GLCTQ6Y288 498 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 C3P1Q6ZMU1 363 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 RASSF6Q6ZTQ3 369 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TPRG1Q6ZUI0 275 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 CHMP1BQ7LBR1 199 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 SHFQ7M4L6 423 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 LURAP1LQ8IV03 231 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 OR4N4Q8N0Y3 316 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 KLHL36Q8N4N3 616 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 TEX19Q8NA77 164 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 GPR156Q8NFN8 814 aa6.51□□□□□ -1.37
CPSF7-215ENST00000536145 OVCA2Q8WZ82 227 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms