RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 EEF1A1P5Q5VTE0 462 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 YRDCQ86U90 279 aaKnown RBP11.96□□□□□ -0.49
RTN3-207ENST00000536011 IFNEQ86WN2 208 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 PLCZ1Q86YW0 608 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 FAM9CQ8IZT9 166 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 NAXEQ8NCW5 288 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 CHDHQ8NE62 594 aaPredicted RBP11.96□□□□□ -0.49
RTN3-207ENST00000536011 GOT1L1Q8NHS2 421 aaPredicted RBP11.96□□□□□ -0.49
RTN3-207ENST00000536011 TMBIM1Q969X1 311 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 EXOSC8Q96B26 276 aaKnown RBP11.96□□□□□ -0.49
RTN3-207ENST00000536011 SLC35A4Q96G79 324 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 BBS4Q96RK4 519 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 NODALQ96S42 347 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 TM9SF2Q99805 663 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 SH3GL2Q99962 352 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 OR2B2Q9GZK3 357 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 GALNT9Q9HCQ5 603 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 SERHLQ9NQF3 203 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 MIEF1Q9NQG6 463 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 SLC35C2Q9NQQ7 365 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 CRIM1Q9NZV1 1036 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 HEY2Q9UBP5 337 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 OR10H1Q9Y4A9 318 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 WIF1Q9Y5W5 379 aa11.96□□□□□ -0.49
RTN3-207ENST00000536011 SERTM1A2A2V5 107 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 PLOD3O60568 738 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 GLRA3O75311 464 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 CRCPO75575 148 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 GOSR1O95249 250 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 ANXA4P09525 319 aaPredicted RBP11.95□□□□□ -0.5
RTN3-207ENST00000536011 MYL2P10916 166 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 GCAP28676 217 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 SRD5A2P31213 254 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 ZNF136P52737 540 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 DGKQP52824 942 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 HMGCS1Q01581 520 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 DUSP2Q05923 314 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 FBXW10Q5XX13 1052 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 FAM180BQ6P0A1 224 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 LARP4Q71RC2 724 aaKnown RBP eCLIP11.95□□□□□ -0.5
RTN3-207ENST00000536011 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 OR9A2Q8NGT5 310 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 VSTM2LQ96N03 204 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 SFXN3Q9BWM7 321 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 SIRT5Q9NXA8 310 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 TAS2R10Q9NYW0 307 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
RTN3-207ENST00000536011 WBP11Q9Y2W2 641 aaKnown RBP11.95□□□□□ -0.5
RTN3-207ENST00000536011 ZFHX3Q15911 3703 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 MTORP42345 2549 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 A0A087WV62 115 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 TUBAL3A6NHL2 446 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 A6NNC1 897 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 GOLGA8RI6L899 631 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 FREM3P0C091 2139 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 TMIGD3P0DMS9 266 aaPredicted RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 CT45A8P0DMV1 189 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CT45A9P0DMV2 189 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CHN1P15882 459 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 DDCP20711 480 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CHMP24386 653 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 DNASE1P24855 282 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 NTSP30990 170 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 PTGDSP41222 190 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 WNT3P56703 355 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 RAE1P78406 368 aaKnown RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 ZNF155Q12901 538 aaPredicted RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 SLC29A2Q14542 456 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 ZNHIT3Q15649 155 aaPredicted RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 CEBPEQ15744 281 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CT45A2Q5DJT8 189 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CFAP157Q5JU67 520 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 DCST1Q5T197 706 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 CDC26Q8NHZ8 85 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 FAM76AQ8TAV0 307 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 KAT2AQ92830 837 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 APIPQ96GX9 242 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 FOXC2Q99958 501 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 GPATCH1Q9BRR8 931 aaKnown RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 EBPLQ9BY08 206 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 PPCSQ9HAB8 311 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 FOLH1BQ9HBA9 442 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 MRTO4Q9UKD2 239 aaKnown RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 MRPS18CQ9Y3D5 142 aaKnown RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 MAP1AP78559 2803 aaPredicted RBP11.94□□□□□ -0.5
RTN3-207ENST00000536011 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
RTN3-207ENST00000536011 TSPAN2O60636 221 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 TACR1P25103 407 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 SOX18P35713 384 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 CPA2P48052 419 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms