RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 HDDC3Q8N4P3 179 aa15.05■□□□□ -0
CHMP1A-202ENST00000535997 NUP43Q8NFH3 380 aa15.05■□□□□ -0
CHMP1A-202ENST00000535997 TM9SF4Q92544 642 aa15.05■□□□□ -0
CHMP1A-202ENST00000535997 ZG16BQ96DA0 208 aa15.05■□□□□ -0
CHMP1A-202ENST00000535997 ABCB9Q9NP78 766 aa15.05■□□□□ -0
CHMP1A-202ENST00000535997 SF3B6Q9Y3B4 125 aaKnown RBP15.05■□□□□ -0
CHMP1A-202ENST00000535997 A0A1W2PQL4 384 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 PRR19A6NJB7 356 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 FAM170BA6NMN3 283 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 SLC30A4O14863 429 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 KRT8P05787 483 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 CEACAM5P06731 702 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 FGF9P31371 208 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 TGM4P49221 684 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 RUNX3Q13761 415 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 FGL2Q14314 439 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 OR2G6Q5TZ20 316 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ZNF730Q6ZMV8 503 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 PRR23CQ6ZRP0 262 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 CACUL1Q86Y37 369 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 GATAD2BQ8WXI9 593 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 DIO2Q92813 273 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 RFKQ969G6 155 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ZNF681Q96N22 645 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ARHGAP9Q9BRR9 750 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 PRR14Q9BWN1 585 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 TRPV4Q9HBA0 871 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 KLHL28Q9NXS3 571 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 SLC17A4Q9Y2C5 497 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 GSTK1Q9Y2Q3 226 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 STON1Q9Y6Q2 735 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 FABP12A6NFH5 140 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 OR52A4PA6NMU1 304 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 KDM4EB2RXH2 506 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 SEC14L5O43304 696 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 UBXN7O94888 489 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ADH1BP00325 375 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 HOXB3P14651 431 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 PRKAR1BP31321 381 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 SDC2P34741 201 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 RFX2P48378 723 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 HNRNPA0Q13151 305 aaKnown RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 SGCGQ13326 291 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 DDI2Q5TDH0 399 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 RSBN1Q5VWQ0 802 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 RAB43Q86YS6 212 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 GDPD1Q8N9F7 314 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 MFSD9Q8NBP5 474 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 TMEM145Q8NBT3 493 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 OR6F1Q8NGZ6 308 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 AP3S1Q92572 193 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 OSTF1Q92882 214 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 UFD1Q92890 307 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ZNF486Q96H40 463 aaPredicted RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 TRMT61BQ9BVS5 477 aaKnown RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 TEX12Q9BXU0 123 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 TIGARQ9NQ88 270 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 GDE1Q9NZC3 331 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 SNX7Q9UNH6 387 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 ZFR2Q9UPR6 939 aaKnown RBP15.04■□□□□ -0
CHMP1A-202ENST00000535997 ZNF780BQ9Y6R6 833 aa15.04■□□□□ -0
CHMP1A-202ENST00000535997 MDC1Q14676 2089 aaKnown RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 GSAPA4D1B5 854 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 CCNYL3P0C7X3 344 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 CERS1P27544 350 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 GABRA5P31644 462 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 OMPP47874 163 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 STXBP1P61764 594 aaKnown RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 ENPP2Q13822 863 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 LRRC32Q14392 662 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 TMEM44Q2T9K0 475 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 CRTC2Q53ET0 693 aaPredicted RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 CD200R1LQ6Q8B3 271 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 FAM131AQ6UXB0 335 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 VRK2Q86Y07 508 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 FBXL6Q8N531 539 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 OR8D4Q8NGM9 314 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 PIGXQ8TBF5 258 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 BADQ92934 168 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 DIRAS2Q96HU8 199 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 NEDD4LQ96PU5 975 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 C1QTNF2Q9BXJ5 285 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 ACTRT3Q9BYD9 372 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 TRIM45Q9H8W5 580 aaPredicted RBP15.03■□□□□ -0
CHMP1A-202ENST00000535997 NEK6Q9HC98 313 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 SEMA4GQ9NTN9 838 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 IL20Q9NYY1 176 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 SERGEFQ9UGK8 458 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 GPR52Q9Y2T5 361 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 A0A1W2PP55 124 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 DUXAA6NLW8 204 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 LIMS3P0CW19 117 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 LIMS4P0CW20 117 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 CMPK1P30085 196 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 MC3RP41968 323 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 STAT5AP42229 794 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 RAB8AP61006 207 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 DECR1Q16698 335 aa15.03■□□□□ -0
CHMP1A-202ENST00000535997 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms