RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 HBEGFQ99075 208 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 SH3GL2Q99962 352 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 C1QTNF3Q9BXJ4 246 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 ZBTB26Q9HCK0 441 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 GALNT9Q9HCQ5 603 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 FARSBQ9NSD9 589 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF226Q9NYT6 803 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 WIF1Q9Y5W5 379 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 F8P00451 2351 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 LINC01387J3KSC0 135 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 TO15178 435 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 UGT2B11O75310 529 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 IL3P08700 152 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 ANXA4P09525 319 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 PEPDP12955 493 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 PCSK2P16519 638 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 KLK2P20151 261 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 DPP4P27487 766 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 TIA1P31483 386 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 HSD17B3P37058 310 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 MAGEA12P43365 314 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 AGFG1P52594 562 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 PNLIPRP2P54317 469 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 NAGLUP54802 743 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 WNT3P56703 355 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 MRPS35P82673 323 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 BTKQ06187 659 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 GALNT1Q10472 559 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 DECR1Q16698 335 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 TRMT12Q53H54 448 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 RAET1LQ5VY80 246 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 PAMR1Q6UXH9 720 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 TRMT10CQ7L0Y3 403 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 CCDC63Q8NA47 563 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 NAXEQ8NCW5 288 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 NRGNQ92686 78 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 INTS12Q96CB8 462 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 NTNG2Q96CW9 530 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 FAM111AQ96PZ2 611 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 NODALQ96S42 347 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 Q9N2J8 555 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 SLC35C2Q9NQQ7 365 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 DDX18Q9NVP1 670 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 DCDC2Q9UHG0 476 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 PACSIN3Q9UKS6 424 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 CBLCQ9ULV8 474 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 OTOGQ6ZRI0 2925 aa12.06□□□□□ -0.48
CLSTN3-205ENST00000535452 C2orf72A6NCS6 295 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CLCA1A8K7I4 914 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 SMNDC1O75940 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 RCBTB2O95199 551 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 IMPDH1P20839 514 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 GPC1P35052 558 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 RFX3P48380 749 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 DSCR4P56555 118 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 HMGCS1Q01581 520 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF763Q0D2J5 394 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 GANABQ14697 944 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 SGCBQ16585 318 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF678Q5SXM1 525 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 SEM1Q6ZVN7 128 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 SLC44A2Q8IWA5 706 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CEP112Q8N8E3 955 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CNEP1R1Q8N9A8 125 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 OR9A2Q8NGT5 310 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 LINC01560Q8TB33 94 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 HGDQ93099 445 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CNRIP1Q96F85 164 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 SLC35A4Q96G79 324 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 BTBD9Q96Q07 612 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 PRRG4Q9BZD6 226 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 OR2B2Q9GZK3 357 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 MID1IP1Q9NPA3 183 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 PSMC3IPQ9P2W1 217 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CES1P1Q9UKY3 287 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 GRID1Q9ULK0 1009 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 DTX4Q9Y2E6 619 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 RPH3AQ9Y2J0 694 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 GPR55Q9Y2T6 319 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 CSMD1Q96PZ7 3565 aa12.05□□□□□ -0.48
CLSTN3-205ENST00000535452 TEP1Q99973 2627 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 A0A1W2PS29 197 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 SH3D21A4FU49 640 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 SLC22A20A6NK97 555 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 TTC36A6NLP5 189 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 FAM171A2A8MVW0 826 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 KCNH1O95259 989 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 CBX7O95931 251 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 CHEK2O96017 543 aa12.04□□□□□ -0.48
CLSTN3-205ENST00000535452 CRHP06850 196 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms