RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 AKAP10O43572 662 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 UGT2B11O75310 529 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 LYPLA1O75608 230 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 GDF1P27539 372 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 KRT20P35900 424 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 RPL3P39023 403 aaKnown RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 EFR3AQ14156 821 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 MPP2Q14168 576 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF385BQ569K4 471 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 C6orf136Q5SQH8 315 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 BEND6Q5SZJ8 279 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 FNDC7Q5VTL7 733 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 CES4AQ5XG92 561 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ANKRD26P1Q6NSI1 321 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 SLC30A6Q6NXT4 461 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 TMCO6Q96DC7 493 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ELP4Q96EB1 424 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ZBED6CLQ96FA7 236 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 C3orf30Q96M34 536 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 COL21A1Q96P44 957 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 NODALQ96S42 347 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 UBQLN3Q9H347 655 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 EXO5Q9H790 373 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 ACSS1Q9NUB1 689 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 KLRF1Q9NZS2 232 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 BAIAP2L1Q9UHR4 511 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-203ENST00000535297 C15orf41Q9Y2V0 281 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 RAP2CQ9Y3L5 183 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 OR10H1Q9Y4A9 318 aa12.64□□□□□ -0.39
TMEM258-203ENST00000535297 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 SCAMP2O15127 329 aaKnown RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 ITM2AO43736 263 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 TSPAN2O60636 221 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 PEX11AO75192 247 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 NME6O75414 186 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 REM1O75628 298 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 PRPS2P11908 318 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 BGNP21810 368 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 IL12BP29460 328 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 PNLIPRP2P54317 469 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 MRPS22P82650 360 aaKnown RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 PSG6Q00889 435 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 HSPB3Q12988 150 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 MAD2L1Q13257 205 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 ZNHIT3Q15649 155 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 SMU1Q2TAY7 513 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 EMC4Q5J8M3 183 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 TMEM211Q6ICI0 200 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF551Q7Z340 670 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 SLC44A2Q8IWA5 706 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 LIX1Q8N485 282 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 ZNF781Q8N8C0 355 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 FNDC5Q8NAU1 212 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 CIDECQ96AQ7 238 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-203ENST00000535297 TUBGCP3Q96CW5 907 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 C1orf50Q9BV19 199 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 SLC6A15Q9H2J7 730 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 SH3BP4Q9P0V3 963 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 ATP6V1HQ9UI12 483 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 HAO1Q9UJM8 370 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 CACNA1CQ13936 2221 aa12.63□□□□□ -0.39
TMEM258-203ENST00000535297 TMEM120BA0PK00 339 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PRSS44E7EML9 344 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 SNPHO15079 494 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 HPNP05981 417 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ENDOUP21128 410 aaKnown RBP12.62□□□□□ -0.39
TMEM258-203ENST00000535297 COL8A1P27658 744 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PTPN6P29350 595 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 GPC1P35052 558 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 DCTP40126 519 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PTGDSP41222 190 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 SLC1A6P48664 564 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 CDK9P50750 372 aaKnown RBP12.62□□□□□ -0.39
TMEM258-203ENST00000535297 SLC18A1P54219 525 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 PDCD2Q16342 344 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-203ENST00000535297 CYP27C1Q4G0S4 372 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 GXYLT1Q4G148 440 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 WLSQ5T9L3 541 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 TIGD3Q6B0B8 471 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 DESI1Q6ICB0 168 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ANGPTL8Q6UXH0 198 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
TMEM258-203ENST00000535297 LARP4Q71RC2 724 aaKnown RBP eCLIP12.62□□□□□ -0.391e-11■■■■■ 44
TMEM258-203ENST00000535297 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 OR1J4Q8NGS1 313 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 NEIL3Q8TAT5 605 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 RNF138Q8WVD3 245 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 DTNBP1Q96EV8 351 aa12.62□□□□□ -0.39
TMEM258-203ENST00000535297 ADOQ96SZ5 270 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms