RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 DNAJC19Q96DA6 116 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MRPL38Q96DV4 380 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 EPSTI1Q96J88 318 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 POM121L2Q96KW2 1035 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 LINC00479Q96M42 142 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 PLIN2Q99541 437 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TXN2Q99757 166 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 SH3GL1Q99961 368 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TCHPQ9BT92 498 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MCRIP2Q9BUT9 160 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 TRAF4Q9BUZ4 470 aaPredicted RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 FAM129AQ9BZQ8 928 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 GBA3Q9H227 469 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CARD9Q9H257 536 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 VCXQ9H320 206 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CENPHQ9H3R5 247 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 NXF3Q9H4D5 531 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 A4GALTQ9NPC4 353 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 FAM114A2Q9NRY5 505 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 TBC1D13Q9NVG8 400 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MARCH5Q9NX47 278 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 DPP3Q9NY33 737 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 IL20Q9NYY1 176 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 NINJ2Q9NZG7 142 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 COX16Q9P0S2 106 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 THEGQ9P2T0 379 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CACNG5Q9UF02 275 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 BAIAP2L1Q9UHR4 511 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 EXOC7Q9UPT5 735 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 ITM2BQ9Y287 266 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 MRPS28Q9Y2Q9 187 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 FAM32AQ9Y421 112 aaKnown RBP3.02□□□□□ -1.93
USP48-215ENST00000534705 HES2Q9Y543 173 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 PI4KAP42356 2102 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 VPS13AQ96RL7 3174 aa3.02□□□□□ -1.93
USP48-215ENST00000534705 CHD5Q8TDI0 1954 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 MYO15AQ9UKN7 3530 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ATP8B3O60423 1300 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SMIM31A0A1B0GVY4 71 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ARHGEF35A5YM69 484 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ARL5CA6NH57 179 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 LRRIQ4A6NIV6 560 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 HIDE1A8MVS5 230 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 O00370 1275 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PTGESO14684 152 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 RASGRF2O14827 1237 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SLC30A4O14863 429 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 DCXO43602 365 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SNX3O60493 162 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 HSF2BPO75031 334 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZNF821O75541 412 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 CDC123O75794 336 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 DFFBO76075 338 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZWINTO95229 277 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 LCA5LO95447 670 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PIGRP01833 764 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 GBAP04062 536 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 KRT16P08779 473 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CLTAP09496 248 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 IL9P15248 144 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 EEF1B2P24534 225 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 GABRA5P31644 462 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 GTF2H1P32780 548 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PCGF2P35227 344 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 IFNAR2P48551 515 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SLC11A1P49279 550 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 NAGLUP54802 743 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 MTTPP55157 894 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CASP9P55211 416 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PEX3P56589 373 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ST8SIA6P61647 398 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 KCNJ2P63252 427 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CDR2Q01850 454 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 HSPA14Q0VDF9 509 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 GIT2Q14161 759 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TFDP1Q14186 410 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TMEM187Q14656 261 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PDK1Q15118 436 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PPP1R7Q15435 360 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 UAP1Q16222 522 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 CBWD6Q4V339 395 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SLC39A12Q504Y0 691 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 LIN52Q52LA3 116 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 BOLA3Q53S33 107 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 XKR4Q5GH76 650 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CBWD3Q5JTY5 395 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SHEQ5VZ18 495 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TWF2Q6IBS0 349 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 TMEM211Q6ICI0 200 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PWWP2BQ6NUJ5 590 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SLC39A4Q6P5W5 647 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 NOTUMQ6P988 496 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ALKAL1Q6UXT8 129 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TRPM8Q7Z2W7 1104 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CENPVQ7Z7K6 275 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 CNTN4Q8IWV2 1026 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZBED8Q8IZ13 594 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 NPEPL1Q8NDH3 523 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TMEM161BQ8NDZ6 487 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms