RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	HDHD5	Q9BXW7	423 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC22A4	Q9H015	551 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TMEM185B	Q9H7F4	350 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC35A3	Q9Y2D2	325 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532		A6NIZ1	184 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MT-ND2	P03891	347 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HTR3A	P46098	478 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CRISP1	P54107	249 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRPS1	P60891	318 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RAP1B	P61224	184 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RAP1A	P62834	184 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CHRFAM7A	Q494W8	412 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TMEM53	Q6P2H8	277 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MINDY1	Q8N5J2	469 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	METTL25	Q8N6Q8	603 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC41A3	Q96GZ6	507 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NGB	Q9NPG2	151 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	IGSF5	Q9NSI5	407 aa		14.9	□□□□□ -0.02
NCAPD3-213	ENST00000534532	IRS1	P35568	1242 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	STK11	Q15831	433 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR52E2	Q8NGJ4	325 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NUFIP1	Q9UHK0	495 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MYH1	P12882	1939 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TBX10	O75333	385 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CEL	P19835	753 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TNFSF4	P23510	183 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	FRK	P42685	505 aa	Predicted RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HTR6	P50406	440 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MEP1A	Q16819	746 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LEG1	Q6P5S2	330 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GALNT6	Q8NCL4	622 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MNT	Q99583	582 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TRNAU1AP	Q9NX07	287 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	EGF	P01133	1207 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GPR4	P46093	362 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MAZ	P56270	477 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SHF	Q7M4L6	423 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TRMT10A	Q8TBZ6	339 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CHIA	Q9BZP6	476 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MED11	Q9P086	117 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NAV1	Q8NEY1	1877 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	AURKA	O14965	403 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MAGEA8	P43361	318 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	DAP3	P51398	398 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MGAT3	Q09327	533 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	UBALD2	Q8IYN6	164 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PPP1R35	Q8TAP8	253 aa		14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	FARSA	Q9Y285	508 aa	Known RBP	14.89	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KCNK5	O95279	499 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	C1orf105	O95561	183 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CD79A	P11912	226 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	AHR	P35869	848 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	RNF220	Q5VTB9	566 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PARM1	Q6UWI2	310 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CNEP1R1	Q8N9A8	125 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR9K2	Q8NGE7	335 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	METTL2A	Q96IZ6	378 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	INSM2	Q96T92	566 aa	Predicted RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	BARD1	Q99728	777 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HS3ST3A1	Q9Y663	406 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CRABP1	P29762	137 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CCR7	P32248	378 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PYCR1	P32322	319 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PRDX1	Q06830	199 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NADSYN1	Q6IA69	706 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	HACD2	Q6Y1H2	254 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	GATAD2B	Q8WXI9	593 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	UTP23	Q9BRU9	249 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TMEM168	Q9H0V1	697 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	DPAGT1	Q9H3H5	408 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF701	Q9NV72	531 aa	Predicted RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KCNIP3	Q9Y2W7	256 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SLC33A1	O00400	549 aa	Predicted RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	PLAT	P00750	562 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	C1S	P09871	688 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	DCD	P81605	110 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ATAD3C	Q5T2N8	411 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	LRRN1	Q6UXK5	716 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	CDHR3	Q6ZTQ4	885 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR13C3	Q8NGS6	347 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MAGIX	Q9H6Y5	334 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	KDM3B	Q7LBC6	1761 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR2AT4	A6NND4	320 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	OR7A10	O76100	309 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	NDUFB2	O95178	105 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	C19orf47	Q8N9M1	422 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SPERT	Q8NA61	448 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SLC45A3	Q96JT2	553 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ARNT2	Q9HBZ2	717 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	BTNL2	Q9UIR0	455 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SETD1A	O15047	1707 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	JRK	O75564	520 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	S100A9	P06702	114 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	AOAH	P28039	575 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	MSX1	P28360	303 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	EIF5AL1	Q6IS14	154 aa	Known RBP	14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	TMED4	Q7Z7H5	227 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	ZNF442	Q9H7R0	627 aa		14.88	□□□□□ -0.03
NCAPD3-213	ENST00000534532	SH2B3	Q9UQQ2	575 aa		14.88	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms