RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 PTPN6P29350 595 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 GCKP35557 465 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 MC3RP41968 323 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 GSTM5P46439 218 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 RFX3P48380 749 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 RPL38P63173 70 aaKnown RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TLE4Q04727 773 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CRYZQ08257 329 aaKnown RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 GALNTL6Q49A17 601 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CT45A2Q5DJT8 189 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 ANKRD26P1Q6NSI1 321 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 NPSR1Q6W5P4 371 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 LARP4Q71RC2 724 aaKnown RBP eCLIP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TRABD2AQ86V40 505 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 LIX1LQ8IVB5 337 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 DDIASQ8IXT1 998 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 RIBC1Q8N443 379 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 FAM83FQ8NEG4 500 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 OR4N2Q8NGD1 307 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 OR14L1PQ8NHC6 308 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CLHC1Q8NHS4 586 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 AGR3Q8TD06 166 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TMCO6Q96DC7 493 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 C11orf24Q96F05 449 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 EGLN2Q96KS0 407 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 LURAP1Q96LR2 239 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 VSTM2LQ96N03 204 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 BTBD9Q96Q07 612 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TIMP4Q99727 224 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 MECRQ9BV79 373 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 UGT2B28Q9BY64 529 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 ENKD1Q9H0I2 346 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 UBQLN3Q9H347 655 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 LRTM1Q9HBL6 345 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 DDX18Q9NVP1 670 aaKnown RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 SIRT5Q9NXA8 310 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TAS2R9Q9NYW1 312 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 SLC17A7Q9P2U7 560 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 ITGB1BP2Q9UKP3 347 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 SPG11Q96JI7 2443 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 AKAP6Q13023 2319 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 OR6C70A6NIJ9 312 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 KDM4EB2RXH2 506 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 TMEM233B4DJY2 109 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 FAM47E-STBD1D6RA91 191 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 TO15178 435 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 SCO2O43819 266 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 PLOD3O60568 738 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 CHRNGP07510 517 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 NUDT17P0C025 328 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 BMP7P18075 431 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 MSX1P28360 303 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 GPC1P35052 558 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 PTGDSP41222 190 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 KRTAP10-9P60411 292 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 TFF3Q07654 80 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 HSPB3Q12988 150 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 MYBPHQ13203 477 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 EFR3AQ14156 821 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 CEBPEQ15744 281 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 ACSF3Q4G176 576 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 DCST1Q5T197 706 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 RIPPLY2Q5TAB7 128 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 VASNQ6EMK4 673 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 OR5M10Q6IEU7 315 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 DCHS2Q6V1P9 2916 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 ZCCHC23Q6ZST2 131 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 ZNF551Q7Z340 670 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 SZRD1Q7Z422 152 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 CLYBLQ8N0X4 340 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 BANPQ8N9N5 519 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 OR2T11Q8NH01 316 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 AMDHD1Q96NU7 426 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 TSSK3Q96PN8 268 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 TRIB1Q96RU8 372 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 GLIPR2Q9H4G4 154 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 EQTNQ9NQ60 294 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 C1orf109Q9NX04 203 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 DKKL1Q9UK85 242 aa9.52□□□□□ -0.89
CAPN1-225ENST00000533704 EXO1Q9UQ84 846 aaKnown RBP9.52□□□□□ -0.89
CAPN1-225ENST00000533704 ANKHD1Q8IWZ3 2542 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 HSPB2A8KAH6 182 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 AHRRA9YTQ3 701 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 H0Y3Z8 333 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PDPK1O15530 556 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 TSPAN2O60636 221 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
CAPN1-225ENST00000533704 NEFHP12036 1026 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 CYP4B1P13584 511 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 BMP5P22003 454 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 UQCRC1P31930 480 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 PRKAG1P54619 331 aa9.51□□□□□ -0.89
CAPN1-225ENST00000533704 MRPS22P82650 360 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms