RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 STX17P56962 302 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 RIPK4P57078 832 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 BTG3Q14201 252 aaPredicted RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 CARTPTQ16568 116 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 OLFM4Q6UX06 510 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 TFAP2EQ6VUC0 442 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 BNIPLQ7Z465 357 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 GOLGA7Q7Z5G4 137 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 YRDCQ86U90 279 aaKnown RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 VPS36Q86VN1 386 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 GPBP1Q86WP2 473 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 CENPSQ8N2Z9 138 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 SETD7Q8WTS6 366 aaKnown RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 SNX21Q969T3 373 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 NUS1Q96E22 293 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 DNAJA3Q96EY1 480 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 VPS39Q96JC1 886 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 ZNF560Q96MR9 790 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 DEFB118Q96PH6 123 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 DPH7Q9BTV6 452 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 NDUFAF3Q9BU61 184 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 ZNF702PQ9H963 129 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 PRMT8Q9NR22 394 aaPredicted RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 TMEM9Q9P0T7 183 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 MBD2Q9UBB5 411 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 BARX2Q9UMQ3 279 aaPredicted RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 NOL7Q9UMY1 257 aaKnown RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 ABCG2Q9UNQ0 655 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 PDE10AQ9Y233 779 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 CA5BQ9Y2D0 317 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 TDRKHQ9Y2W6 561 aaKnown RBP1.89□□□□□ -2.11
ATM-220ENST00000533526 FLVCR1Q9Y5Y0 555 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 FKBP7Q9Y680 259 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 USP6P35125 1406 aa1.89□□□□□ -2.11
ATM-220ENST00000533526 NPC1L1Q9UHC9 1359 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 WI2-2373I1.2A0A1W2PRP0 233 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CCDC69A6NI79 296 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 TLR4O00206 839 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 RAMP1O60894 148 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 TOXO94900 526 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 HSPB1P04792 205 aaKnown RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 SLC35G4P0C7Q5 338 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CD1EP15812 388 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 PSMB1P20618 241 aaKnown RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 IGHV1-2P23083 117 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 SLC6A8P48029 635 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 SLC26A2P50443 739 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CCL11P51671 97 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 HNRNPFP52597 415 aaKnown RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 NLRP11P59045 1033 aaKnown RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 HERVK_113P63132 956 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 ERVK-8P63133 956 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 PUDPQ08623 228 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 RPA4Q13156 261 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 IL18R1Q13478 541 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 RAB35Q15286 201 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 PRR4Q16378 134 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 PARP6Q2NL67 630 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 ACSF3Q4G176 576 aaPredicted RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 PRAMEF7Q5VXH5 474 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 MOB1BQ7L9L4 216 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 PRSS48Q7RTY5 328 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 ZNF677Q86XU0 584 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CCDC51Q96ER9 411 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 C11orf24Q96F05 449 aaPredicted RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 ERVK-6Q9BXR3 956 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 FTHL17Q9BXU8 183 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 DDX47Q9H0S4 455 aaKnown RBP1.88□□□□□ -2.11
ATM-220ENST00000533526 ELOVL2Q9NXB9 296 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CYP39A1Q9NYL5 469 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 ZMYM6O95789 1325 aa1.88□□□□□ -2.11
ATM-220ENST00000533526 CFAP65Q6ZU64 1925 aaKnown RBP1.87□□□□□ -2.11
ATM-220ENST00000533526 TMEM110-MUSTN1A8MSY1 372 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.87□□□□□ -2.11
ATM-220ENST00000533526 RTL8CO15255 209 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 KINO60870 393 aaKnown RBP1.87□□□□□ -2.11
ATM-220ENST00000533526 SDC3O75056 442 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 LRP3O75074 770 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 NOL4O94818 638 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 CXCL14O95715 111 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 ACTL6AO96019 429 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 IGLV1-47P01700 117 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 KRT6AP02538 564 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 KRT6BP04259 564 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 GNSP15586 552 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 SDC1P18827 310 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 UGT1A3P35503 534 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 COPB2P35606 906 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 ACVR1BP36896 505 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 KRT6CP48668 564 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 EMDP50402 254 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 HLCSP50747 726 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 RPL32P62910 135 aaKnown RBP1.87□□□□□ -2.11
ATM-220ENST00000533526 GFPT1Q06210 699 aaPredicted RBP1.87□□□□□ -2.11
ATM-220ENST00000533526 C17orf67Q0P5P2 114 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 CYP51A1Q16850 503 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 ZNF699Q32M78 642 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 CYBRD1Q53TN4 286 aa1.87□□□□□ -2.11
ATM-220ENST00000533526 BEND6Q5SZJ8 279 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms