RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 A0A0U1RQS6 177 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 A0A1B0GTW7 788 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TMEM218A2RU14 115 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 BTBD17A6NE02 478 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TBC1D3FA6NER0 549 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ASB14A6NK59 587 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF716A6NP11 495 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 MAGEB17A8MXT2 336 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PROB1E7EW31 1015 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF263O14978 683 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 LDLRAD4O15165 306 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 EIF3DO15371 548 aaKnown RBP eCLIP5.18□□□□□ -1.58
CD44-236ENST00000533222 IRAK2O43187 625 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 COCHO43405 550 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SLC43A1O75387 559 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TUSC2O75896 110 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 MOCS3O95396 460 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 GSRP00390 522 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 RPLP2P05387 115 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 MELTFP08582 738 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 C1SP09871 688 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ATXN1LP0C7T5 689 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF735P0CB33 412 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 INSRRP14616 1297 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 UQCRC2P22695 453 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ME2P23368 584 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ITGA3P26006 1051 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SLC6A1P30531 599 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 BUD31P41223 144 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 PIK3CBP42338 1070 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 GPR4P46093 362 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CCT4P50991 539 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 RAB5CP51148 216 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF81P51508 661 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 XKP51811 444 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 AQP5P55064 265 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 RAB1AP62820 205 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 DYNLL1P63167 89 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 SLC25A3Q00325 362 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SP3Q02447 781 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CSTF1Q05048 431 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 MBTD1Q05BQ5 628 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 RASGEF1BQ0VAM2 473 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 LCP2Q13094 533 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PNOCQ13519 176 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FASTKQ14296 549 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF630Q2M218 657 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 HNRNPA1L2Q32P51 320 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF404Q494X3 552 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SBK1Q52WX2 424 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SGO1Q5FBB7 561 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 DCAF10Q5QP82 559 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CERCAMQ5T4B2 595 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FAM102AQ5T9C2 384 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ZDHHC20Q5W0Z9 365 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FBXW9Q5XUX1 488 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 WSCD1Q658N2 575 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 RGS7BPQ6MZT1 257 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ULK3Q6PHR2 472 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SHC4Q6S5L8 630 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SLC39A5Q6ZMH5 540 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TRILQ7L0X0 811 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CHST3Q7LGC8 479 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SPRED1Q7Z699 444 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 KLBQ86Z14 1044 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CEP97Q8IW35 865 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZFPM1Q8IX07 1006 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 CPNE9Q8IYJ1 553 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF679Q8IYX0 411 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 GPC2Q8N158 579 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF786Q8N393 782 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF276Q8N554 614 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 RTL3Q8N8U3 475 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 HSD17B11Q8NBQ5 300 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 UXS1Q8NBZ7 420 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FAM83FQ8NEG4 500 aaPredicted RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 BPIFCQ8NFQ6 507 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 OR52N4Q8NGI2 321 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 OR52J3Q8NH60 311 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 WDR36Q8NI36 951 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 HASPINQ8TF76 798 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SELENOMQ8WWX9 145 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 TM9SF4Q92544 642 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 OSTF1Q92882 214 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 FAM162AQ96A26 154 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 NXNL1Q96CM4 212 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PDLIM5Q96HC4 596 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 NARS2Q96I59 477 aaKnown RBP5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF479Q96JC4 524 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ZNF354BQ96LW1 612 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 OR52B2Q96RD2 323 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 AGPAT1Q99943 283 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 NDUFAF3Q9BU61 184 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 ITPAQ9BY32 194 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PKIBQ9C010 78 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 SLITRK2Q9H156 845 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 PCED1AQ9H1Q7 454 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 HEXA-AS1Q9H8Q6 139 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 WDR41Q9HAD4 459 aa5.18□□□□□ -1.58
CD44-236ENST00000533222 C3orf14Q9HBI5 128 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms