RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HGDQ93099 445 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TMBIM1Q969X1 311 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TLCD1Q96CP7 247 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TUBGCP3Q96CW5 907 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 MTERF3Q96E29 417 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 SORT1Q99523 831 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 C1orf50Q9BV19 199 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 METTL7AQ9H8H3 244 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 DDX18Q9NVP1 670 aaKnown RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 ARHGAP21Q5T5U3 1957 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 CACNA1CQ13936 2221 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 A0A1B0GVC2 190 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 OR6C70A6NIJ9 312 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 UPK1AO00322 258 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 UGT2B11O75310 529 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 PSMG1O95456 288 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 PRPS2P11908 318 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 GPC1P35052 558 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 HPCAL1P37235 193 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 FRKP42685 505 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-210ENST00000532935 PSPHP78330 225 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 ADORA2A-AS1P86434 159 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 IL23RQ5VWK5 629 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 TMEM81Q6P7N7 255 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 RPTNQ6XPR3 784 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 C3P1Q6ZMU1 363 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 R3HCC1LQ7Z5L2 792 aaKnown RBP14.08□□□□□ -0.16
CPSF1-210ENST00000532935 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 SLC44A2Q8IWA5 706 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-210ENST00000532935 ZFP28Q8NHY6 868 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 ITLN2Q8WWU7 325 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-210ENST00000532935 NTNG2Q96CW9 530 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 ZBED6CLQ96FA7 236 aaPredicted RBP14.08□□□□□ -0.16
CPSF1-210ENST00000532935 SLC35A4Q96G79 324 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 COL21A1Q96P44 957 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 NODALQ96S42 347 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 LDAHQ9H6V9 325 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 QPCTLQ9NXS2 382 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 B4GALT7Q9UBV7 327 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 ATP6V1HQ9UI12 483 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 HAO1Q9UJM8 370 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 CELSR2Q9HCU4 2923 aa14.08□□□□□ -0.16
CPSF1-210ENST00000532935 OR14I1A6ND48 311 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 NPIPA2E9PIF3 369 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 E9PLN8 166 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 NPIPA3F8WFD2 350 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 AQP7O14520 342 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 ADAM10O14672 748 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 SCAMP2O15127 329 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 SUSD5O60279 629 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 TSPAN2O60636 221 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 HCN1O60741 890 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 ABCB7O75027 752 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 REM1O75628 298 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 DDX5P17844 614 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 GDF1P27539 372 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 MASP1P48740 699 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 MAN2A2P49641 1150 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 RPL14P50914 215 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 SLC18A1P54219 525 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 MANFP55145 182 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 PSG6Q00889 435 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 BST1Q10588 318 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 PTGR1Q14914 329 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 FNDC7Q5VTL7 733 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 MRGPRGQ86SM5 289 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 KIRREL3Q8IZU9 778 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 EID3Q8N140 333 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 OR4N2Q8NGD1 307 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 MGARPQ8TDB4 240 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 TMEM41AQ96HV5 264 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 PPP1R36Q96LQ0 422 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 ADOQ96SZ5 270 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 VKORC1Q9BQB6 163 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 OSBPL11Q9BXB4 747 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 ACSS1Q9NUB1 689 aaPredicted RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 EIF3LQ9Y262 564 aaKnown RBP14.07□□□□□ -0.16
CPSF1-210ENST00000532935 OR10H1Q9Y4A9 318 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 HRH3Q9Y5N1 445 aa14.07□□□□□ -0.16
CPSF1-210ENST00000532935 UNC79Q9P2D8 2635 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 TRGV5A0A0B4J1U4 118 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 PRAMEF25A6NGN4 478 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 HMGB1P1B2RPK0 211 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 ICOSLGO75144 302 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 IL12BP29460 328 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 KRT20P35900 424 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 PTGDSP41222 190 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 CDK9P50750 372 aaKnown RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 EMX2Q04743 252 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 MAD2L1Q13257 205 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 SNTA1Q13424 505 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 EFR3AQ14156 821 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 SMU1Q2TAY7 513 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 EMC4Q5J8M3 183 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 AGBL2Q5U5Z8 902 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 SLC30A6Q6NXT4 461 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms