RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LMNTD2Q8IXW0 634 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 BANPQ8N9N5 519 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 LRRC57Q8N9N7 239 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 HTRA1Q92743 480 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PROX1Q92786 737 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 ADIPOR1Q96A54 375 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 S100PBPQ96BU1 408 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 RBM18Q96H35 190 aaKnown RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 VPS39Q96JC1 886 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TBCDQ9BTW9 1192 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TRIM54Q9BYV2 358 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 NXF5Q9H1B4 397 aaKnown RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 RPF2Q9H7B2 306 aaKnown RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 NT5DC2Q9H857 520 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 FANCFQ9NPI8 374 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 FAIMQ9NVQ4 179 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TAS2R13Q9NYV9 303 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 FBXO5Q9UKT4 447 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PACSIN2Q9UNF0 486 aaPredicted RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PCNX3Q9H6A9 2034 aa7.34□□□□□ -1.24
CD44-232ENST00000531118 TCRBV7S3A2A0A539 114 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 SYCE3A1L190 88 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 MEGF11A6BM72 1044 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 AQP8O94778 261 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 WDR47O94967 919 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 FESP07332 822 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 TPM1P09493 284 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 PEPDP12955 493 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 GNAZP19086 355 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 PTNP21246 168 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 DEKP35659 375 aaKnown RBP7.33□□□□□ -1.24
CD44-232ENST00000531118 NEK2P51955 445 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 CLDN15P56746 228 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 BSPH1Q075Z2 132 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 PLCXD2Q0VAA5 305 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 BIKQ13323 160 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 SNTA1Q13424 505 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 GGTLC2Q14390 218 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 BCL2A1Q16548 175 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 CTU2Q2VPK5 515 aaKnown RBP7.33□□□□□ -1.24
CD44-232ENST00000531118 MIDNQ504T8 468 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 C18orf63Q68DL7 685 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 PLCZ1Q86YW0 608 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 ZNF619Q8N2I2 560 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 GBP7Q8N8V2 638 aaPredicted RBP7.33□□□□□ -1.24
CD44-232ENST00000531118 C17orf47Q8NEP4 570 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 C1orf54Q8WWF1 131 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 RIT1Q92963 219 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 OMA1Q96E52 524 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 DTNBP1Q96EV8 351 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 FAM167BQ9BTA0 163 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 MS4A8Q9BY19 250 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 FRMD8P1Q9BZ68 369 aaPredicted RBP7.33□□□□□ -1.24
CD44-232ENST00000531118 PITHD1Q9GZP4 211 aaPredicted RBP7.33□□□□□ -1.24
CD44-232ENST00000531118 EHD3Q9NZN3 535 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 WHRNQ9P202 907 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 GPR52Q9Y2T5 361 aa7.33□□□□□ -1.24
CD44-232ENST00000531118 A0A1W2PS29 197 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 TMEM89A2RUT3 159 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 NPEPPSL1A6NEC2 478 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SHISA9B4DS77 424 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 B4DXG7 233 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 FAM157AC9JC47 383 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PRAMEF4O60810 478 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SS18L1O75177 396 aaPredicted RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 UGT2B11O75310 529 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 H2AFYO75367 372 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 TPM3P06753 285 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 CT62P0C5K7 136 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 CCDC166P0CW27 439 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 APEHP13798 732 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 CD22P20273 847 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PTMSP20962 102 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 GALNSP34059 522 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SRP14P37108 136 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 SUCLG1P53597 346 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 PGGT1BP53609 377 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 HNRNPH2P55795 449 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 C21orf58P58505 322 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 IL2P60568 153 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SNX1Q13596 522 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 DOC2AQ14183 400 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 TAB1Q15750 504 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PDCD2Q16342 344 aaPredicted RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 C18orf21Q32NC0 220 aaPredicted RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 AGAP6Q5VW22 663 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PRAMEF9Q5VWM5 478 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 RAET1LQ5VY80 246 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PLD6Q8N2A8 252 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 METTL25Q8N6Q8 603 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 UBL4BQ8N7F7 174 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 ZNF615Q8N8J6 731 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SRFBP1Q8NEF9 429 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 STEAP2Q8NFT2 490 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 CALML6Q8TD86 181 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 TANKQ92844 425 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 EGFL8Q99944 293 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms