RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 NLGN3Q9NZ94 848 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 ZNF624Q9P2J8 865 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 ASH2LQ9UBL3 628 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 OR12D3Q9UGF7 316 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 AFF4Q9UHB7 1163 aaKnown RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 KCND3Q9UK17 655 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 PPT2Q9UMR5 302 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 EXOSC1Q9Y3B2 195 aaKnown RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 NUP210Q8TEM1 1887 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 SHISA3A0PJX4 238 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 HEPACAM2A8MVW5 462 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 PRMT3O60678 531 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 IL5P05113 134 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 ARF4P18085 180 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 CNR1P21554 472 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 XKP51811 444 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 CDH12P55289 794 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 EFNB1P98172 346 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 PITPNAQ00169 270 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 DEFA6Q01524 100 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 RAB40BQ12829 278 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 MADCAM1Q13477 382 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 MPPE1Q53F39 396 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 FBXO48Q5FWF7 155 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 KIAA1161Q6NSJ0 714 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 FAM111BQ6SJ93 734 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 FAM122BQ7Z309 247 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 GPR65Q8IYL9 337 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 EXOSC8Q96B26 276 aaKnown RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 RGMAQ96B86 450 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 PARK7Q99497 189 aaKnown RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 POLDIP3Q9BY77 421 aaKnown RBP7.68□□□□□ -1.18
CSDE1-214ENST00000530886 C14orf105Q9NVL8 296 aa7.68□□□□□ -1.18
CSDE1-214ENST00000530886 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 OR51F1A6NGY5 319 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 NUDT19A8MXV4 375 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 MCIDASD6RGH6 385 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 BLOC1S5-TXNDC5H3BN57 136 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 PRRG1O14668 218 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 FGF10O15520 208 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-214ENST00000530886 SIX6O95475 246 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 LAP3P28838 519 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 HEPACAMQ14CZ8 416 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 TMEM44Q2T9K0 475 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 ACER2Q5QJU3 275 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 KIAA1211LQ6NV74 962 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GLDNQ6ZMI3 551 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-214ENST00000530886 Q6ZTK2 550 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CLEC20AQ6ZU45 233 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GPRIN1Q7Z2K8 1008 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 MILR1Q7Z6M3 343 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 KLBQ86Z14 1044 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 SERPINA12Q8IW75 414 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 MTMR14Q8NCE2 650 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 OR10K1Q8NGX5 313 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 NEIL3Q8TAT5 605 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 UBTD2Q8WUN7 234 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 NTMT1Q9BV86 223 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 EDEM2Q9BV94 578 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 C1GALT1Q9NS00 363 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 TAS2R3Q9NYW6 316 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 NTMQ9P121 344 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GHRLQ9UBU3 117 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 A0A1W2PRB8 838 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 NAP1L6A6NFF2 107 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 MAGEB17A8MXT2 336 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 C5orf58C9J3I9 102 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GPR31O00270 319 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 TGM5O43548 720 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 SEMA7AO75326 666 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 UBL3O95164 117 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 C22orf31O95567 290 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 IGHV2-5P01817 119 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 EIF4EP06730 217 aaKnown RBP7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CBSLP0DN79 551 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CBSP35520 551 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CD79BP40259 229 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CXADRP78310 365 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CASP12Q6UXS9 341 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 DEF8Q6ZN54 512 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 RGL4Q8IZJ4 473 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 AQP11Q8NBQ7 271 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 OR11G2Q8NGC1 345 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 OR4L1Q8NH43 312 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 C12orf66Q96MD2 445 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 MS4A4EQ96PG1 132 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 ABHD1Q96SE0 405 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GPR20Q99678 358 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 SLC38A1Q9H2H9 487 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 WDR26Q9H7D7 661 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 PLEKHA1Q9HB21 404 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 CACYBPQ9HB71 228 aaKnown RBP7.67□□□□□ -1.18
CSDE1-214ENST00000530886 SARS2Q9NP81 518 aaKnown RBP7.67□□□□□ -1.18
CSDE1-214ENST00000530886 GDE1Q9NZC3 331 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 DNAJC27Q9NZQ0 273 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 KLF15Q9UIH9 416 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
CSDE1-214ENST00000530886 PRAMEF25A6NGN4 478 aa7.66□□□□□ -1.18
CSDE1-214ENST00000530886 YJEFN3A6XGL0 299 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms