RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 NPIPA5A0A0B4J1W7 369 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 C2orf92A0A1B0GVN3 265 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 FAM220BPB1ANY3 271 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 NPIPA7E9PJI5 369 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 IGHEP01854 428 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 CD63P08962 238 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 NPIPA8P0DM63 369 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 ATP6V1B2P21281 511 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 GALNSP34059 522 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 GPR143P51810 404 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 PSG6Q00889 435 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 MS4A2Q01362 244 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 Q0VFX4 171 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 FADDQ13158 208 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 RAPSNQ13702 412 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 SCARB2Q14108 478 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 EBPQ15125 230 aaKnown RBP9.87□□□□□ -0.83
SOX6-213ENST00000530378 ZNHIT3Q15649 155 aaPredicted RBP9.87□□□□□ -0.83
SOX6-213ENST00000530378 GPAT3Q53EU6 434 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 LRRC23Q53EV4 343 aaPredicted RBP9.87□□□□□ -0.83
SOX6-213ENST00000530378 HLA-DQA1Q5Y7H0 255 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 CDC73Q6P1J9 531 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 PGM2L1Q6PCE3 622 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 NDUFAF7Q7L592 441 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 SLC29A4Q7RTT9 530 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 MICU2Q8IYU8 434 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 OR7G1Q8NGA0 311 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 OR10Q1Q8NGQ4 319 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 FGF11Q92914 225 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 VMP1Q96GC9 406 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 TMEM19Q96HH6 336 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 REXO5Q96IC2 774 aaKnown RBP9.87□□□□□ -0.83
SOX6-213ENST00000530378 WWTR1Q9GZV5 400 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 NXF5Q9H1B4 397 aaKnown RBP9.87□□□□□ -0.83
SOX6-213ENST00000530378 FBXO34Q9NWN3 711 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 GIN1Q9NXP7 522 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 OR10H1Q9Y4A9 318 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 PCDHGA6Q9Y5G7 932 aa9.87□□□□□ -0.83
SOX6-213ENST00000530378 ELOVL7A1L3X0 281 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 A8MVJ9 347 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 C5orf58C9J3I9 102 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 WWP2O00308 870 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ARPC2O15144 300 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 MAN1A2O60476 641 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CIB2O75838 187 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 OPN1SWP03999 348 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 NR2F1P10589 423 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ITGAMP11215 1152 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 NR0B1P51843 470 aaKnown RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 RNF4P78317 190 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 MAPK11Q15759 364 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 VMACQ2NL98 169 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 C1orf146Q5VVC0 180 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 HSDL2Q6YN16 418 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ZAR1Q86SH2 424 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 SERPINA11Q86U17 422 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 LGI4Q8N135 537 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ARHGAP24Q8N264 748 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 SIRT6Q8N6T7 355 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CDRT4Q8N9R6 151 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ADAMTS17Q8TE56 1095 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 SLC38A5Q8WUX1 472 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 WDR60Q8WVS4 1066 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 EFHD2Q96C19 240 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 IMMP1LQ96LU5 166 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 QRSL1Q9H0R6 528 aaKnown RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 RUBCNLQ9H714 662 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 PRODH2Q9UF12 536 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 POMPQ9Y244 141 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ARGFXA6NJG6 315 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CXCR6O00574 342 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 PEX12O00623 359 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 BCAS2O75934 225 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 ZIC2O95409 532 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 H6PDO95479 791 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 IGKV1D-16P01601 117 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CHRM4P08173 479 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CYC1P08574 325 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CT45A8P0DMV1 189 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CT45A9P0DMV2 189 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 ARAFP10398 606 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 HSD17B1P14061 328 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CLCN2P51788 898 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 HPCAP84074 193 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CDK6Q00534 326 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 FLOT2Q14254 428 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 CT45A2Q5DJT8 189 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 DCST2Q5T1A1 773 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 DESI1Q6ICB0 168 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 NET1Q7Z628 596 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 C11orf65Q8NCR3 313 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 FAM13CQ8NE31 585 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 BHLHE22Q8NFJ8 381 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 OR5M3Q8NGP4 307 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 FAM162AQ96A26 154 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 RAB3IPQ96QF0 476 aaPredicted RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 LMF2Q9BU23 707 aaKnown RBP9.86□□□□□ -0.83
SOX6-213ENST00000530378 DEFB126Q9BYW3 111 aa9.86□□□□□ -0.83
SOX6-213ENST00000530378 P2RX2Q9UBL9 471 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms